Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0210 ATGGCTTCTTCTCTGAATCCCCTTCTCTGTTTTCTGATTCTGTGCCTGCCTTCTGTTTGTGTTTTTGCCCAAACCAGAAGAAGTAATATCAAAGTGGGCGACTCTTTCACCGCAGATGGCAACAACAACTCATGGGTGGTTTCACCTTCTGGGGATTTTGCTTTTGGGTTTCAACCACATAAAAACAACAGTTTCTTCTTGCTGTCCATCTGGTATGCCAACATTCCAAGCAGAACCATCGTTTGGTATGCCAATGGAGATAATCCTGCTCCAAAGGGGTCAAGAGTTGAGCTTACTGCTTCGGAAGGGCTTAAGCTTACTTATCCTGATGGTCGACCTCTGTGGACACCAAACCCATCTGGTAGTGTTGCTTCTGGTTCCTTGAATGACTCTGGCAACTTTGTTCTTCATGATGGGACATCTAACTCTGTCTGGGAGACCTTCAAGAATCCTAAAGACACCATGTTGCCCTCACAGACTTTGGAGAAGGGAGAAAAGCTTTCTTCTCGGAGGTCAGAGGTGGATTTCGCACGGGGGAGGTTTCAACTTGTTCTCCAGAATGATGGTAATCTTGTGTTGCATTCTGTAAATCTACCATCAGAGTATGCTAATGAAAATTATTTCGATACTGGAACTTTTGAATCCAATAGTTCAAGTCCTGGAATTCGACTAGTCTTCAACGAATCTGGAGAATTTTATGTTTTAAGGGAGAACAATGGTACATACAACTTCTCAGACCAGAGCTTACCCTCTCCAACCCAATTTTATCTTCGAGCTACTCTTAATTTTGATGGAGTTCTCGCTTACTATCGACATCCTAAGGGTTCATCTGGAACTTGGACACCTATCTGGTCAGAGCCAGATAATATCTGTAGTGCAATGCTCATCAGTGAAGGAACAGGCATTTGCGGATATAATAGCATTTGTAGATTGGGTGATGATAGTAGGCCAAATTGTACATGCCCCCAAGGTTATTCCCTACTAGATCCTGATGATCCATATGGTAGTTGTAAACCAGATTTCATACAGGGCTGTAAAGAAGATGAGCTTAGTCAAGGGAAAGATCTATATGATTTTGTGGAGTTGCAAGATACTGATTGGCCTGGCTCTGATTATGTGCTTCTAAAGCCTTTTACAGAGGATGCGTGCAAAAGGGTCTGCATGGAAGATTGTTTTTGTGCCGTTGCCATTTTCAGAGCAGGTGACAGTTGCTGGAAAAAGAGGTTTCCACTTTCAAATGGCAAGTATGACACGAGTCTTAATGGCGGTAAGGCTCTTGTCAAGGTGAGGAAAGGCAATTCCTCCCTAATTGGTCCTTCTGGTCCTCCAATCATCGTAAGAAAGAATCAGTACACTTTGATTTTGGTGGTTTCTGTCCTCTTGGGTAGCTCTGCCTTTCTTAATCTCGTATTAATTGGAGCATCCTGTCTAGGCTTTTCCCCCATTTACCAATTCAAGAAGCAGCTTTCAAATGTTTACCGAAGTGACAGTGCTGTTGAACGCAATCTGCATTGTTTTACTTATAAGGAGCTTGAAGAGGCCACAAATGGATTCAAGGAAGAGTTAGGAAGAGGAGCTTTCGCTGTTGTTTACAAAGGAGCCATTAACATGGGTTCTGCGGTAAACGTAGCAGTCAAAAGGTTGAACACCTTTCTTTTGCAAGAAACTGAGAAGGAATTCAAGAATGAAGTTGATGTCATTGGTCAGACCCATCACAAGAATTTAGTTCGGTTGCTTGGGTTCTGTGCGGATGGAACAGAAAGGATGTTGGTTTATGAGTATATGAGCAATGGCACATTAGCTAGCCTTCTTTTCAGTGACACAAAGCCCAACTGGAAACTACGTCTAAAAATGGCATTTGGGATTGCAAGAGGACTTGTTTACTTACATGAAGATTGTGACACCCAGATCATCCACTGCGACATAAAGCCTCAAAACATACTCCTAGATGACTACTTTAATGCTCGTATCTCTGACTTTGGATTAGCCAAGCTCTTAAACATGAATCAGAGCCGAACCCACACAGCTATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAGAACATGCCTATCACGGCCAAAGTAGATGTCTATAGCTTTGGTGTATTGCTGCTGGAGATAATCTGTTGCAGAAAATGTGTGGACATGGAACCAGAGAATGAGGAGAGAGCAATATTAGCAGATTGGGCTTATGACTGCTACGCAACAGGTTCTCTGGAGGCTTTGGTTGGAGAAGATCAGGAGGCACTAGATGACAAGAATAACCTGGAAAAGTTGTTAATGATTGCTATTTGGTGTACACAAGAGGACCCAACTCTTAGACCCACCATGAGAAAAGTTTCTCAGATGCTTGAAGGAGATGCTGAAGTGCTTGCTCCACCATACCATAACCCAAATAGTGTGACTACTGATCACTATTTATCACTCACCTTGGATGGTTGA 2451 0.428 MASSLNPLLCFLILCLPSVCVFAQTRRSNIKVGDSFTADGNNNSWVVSPSGDFAFGFQPHKNNSFFLLSIWYANIPSRTIVWYANGDNPAPKGSRVELTASEGLKLTYPDGRPLWTPNPSGSVASGSLNDSGNFVLHDGTSNSVWETFKNPKDTMLPSQTLEKGEKLSSRRSEVDFARGRFQLVLQNDGNLVLHSVNLPSEYANENYFDTGTFESNSSSPGIRLVFNESGEFYVLRENNGTYNFSDQSLPSPTQFYLRATLNFDGVLAYYRHPKGSSGTWTPIWSEPDNICSAMLISEGTGICGYNSICRLGDDSRPNCTCPQGYSLLDPDDPYGSCKPDFIQGCKEDELSQGKDLYDFVELQDTDWPGSDYVLLKPFTEDACKRVCMEDCFCAVAIFRAGDSCWKKRFPLSNGKYDTSLNGGKALVKVRKGNSSLIGPSGPPIIVRKNQYTLILVVSVLLGSSAFLNLVLIGASCLGFSPIYQFKKQLSNVYRSDSAVERNLHCFTYKELEEATNGFKEELGRGAFAVVYKGAINMGSAVNVAVKRLNTFLLQETEKEFKNEVDVIGQTHHKNLVRLLGFCADGTERMLVYEYMSNGTLASLLFSDTKPNWKLRLKMAFGIARGLVYLHEDCDTQIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSRTHTAIRGTKGYVALEWFKNMPITAKVDVYSFGVLLLEIICCRKCVDMEPENEERAILADWAYDCYATGSLEALVGEDQEALDDKNNLEKLLMIAIWCTQEDPTLRPTMRKVSQMLEGDAEVLAPPYHNPNSVTTDHYLSLTLDG 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0210 816 Gene3D - 23 150 IPR036426 -
Acco04g0210 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 799 - -
Acco04g0210 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 211 IPR036426 -
Acco04g0210 816 CDD STKc_IRAK 522 789 - -
Acco04g0210 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 24 149 - -
Acco04g0210 816 ProSiteProfiles Protein kinase domain profile. 516 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0210 816 SMART blect_4 37 151 IPR001480 -
Acco04g0210 816 CDD B_lectin 41 151 IPR001480 -
Acco04g0210 816 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672|GO:0006468
Acco04g0210 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 178 270 IPR036426 -
Acco04g0210 816 Gene3D - 151 282 IPR036426 -
Acco04g0210 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Acco04g0210 816 FunFam S-receptor-like serine/threonine-protein kinase 485 594 - -
Acco04g0210 816 SUPERFAMILY Protein kinase-like (PK-like) 499 787 IPR011009 -
Acco04g0210 816 FunFam Serine/threonine-protein kinase 152 294 - -
Acco04g0210 816 SMART serkin_6 516 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0210 816 CDD PAN_AP_plant 351 429 - -
Acco04g0210 816 Pfam D-mannose binding lectin 79 164 IPR001480 -
Acco04g0210 816 ProSitePatterns Protein kinases ATP-binding region signature. 522 546 IPR017441 GO:0005524
Acco04g0210 816 Gene3D Transferase(Phosphotransferase) domain 1 595 795 - -
Acco04g0210 816 Gene3D Phosphorylase Kinase; domain 1 482 594 - -
Acco04g0210 816 PIRSF SRK 1 813 IPR024171 GO:0004674
Acco04g0210 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 795 - -
Acco04g0210 816 ProSiteProfiles Bulb-type lectin domain profile. 21 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0210 Acco-ChrAcco04 1729231 1731681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0210 502 808 Receptor kinase-like Gene Family AT1G60800 43.131 1.55e-75 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g0210 PK_Tyr_Ser-Thr 8.2e-47 CL0016