Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0200 ATGGTCATGAAATTGGACGAGGCTGCAGTGCAGAACGTATTTGTGAAGTCCCTTGAGAATTACGTAAACTGGTGTAATTATTTAGCTATTCAGCCTGTTTGTAGCAGTTTGGATTCTGTTAGCAGAGAGAAAAAAATGCTATATGTGTCATTATATTACCTAATATGGGGTGAAGCTGCCAATGTCAGGTTTCTGCCTGAATGCTTGTGCTACATATTTCACCATATGGCTAGGGAAATGGATGAAATTGTGAGGCAGCAAATTGCACAGCCAGCTAAGAGTTGCATTACTCAGGAGGGTGTTTCTTTTCTTGATCAAGTTATTGTGCCTCTCTATGACGTTATTGCTGCAGAAGCTGCAAACAATGATAATGCGAAGGCACCTCATTCTGCCTGGAGAAACTATGATGATTTTAATGAATATTTCTGGTCTCTCCACTGCTTCAAGCTTGGTTGGCCATGGCGCCTAGGCTCTCCTTTTTTCCAAAAGCCTCTTGGATCAAAGAACTTGCTTAATTCCAGTGGAAGTCGGCGACAGGGAAAGACATCTTTTGTGGAGCATCGAACCTTTCTCCATCTCTACCACAGTTTCCATCGGTTGTGGATATTCCTTTTCATGATGTTTCAGGGCCTGACTCTCGTTGCTTTTAATGATGGACATCTTAATGCTAAGACTCTGCGTGAAGTTCTTAGTCTTGGGCCGACATTTGTTGTGATGAAGTTTCTTGAGAGTACGTGTGTTCTGGACATTTTCATGATGTATGGAGCATATAGAACAACAAGGCACCTAGCCATTTCTCGAATTTTTCTTCGATTTTCATGGTTTGGTGCTGCATCAGTCGTGATAACCTTTCTTTATGTGAAAGCTCTCCTTGAAGAGAGCAAAGGAAGTGGAAATCCAATTGTTTTTAGATTATATGTGATTATCATTGGAATCTATGCGGGTGTGCAAATTTTCATCAGTTTCCTCATGCGAATACCTGCTTGTCATCGTCTGACTAATCAATGTGATCGTTGGCCTTTAATTCGATTTGTAAAGTGGATGCGTCAGGAGCGATACTATGTCGGACGGGGAATGTATGAAAGGAGTACTGATTTCATAAAGTATATGCTATTTTGGCTGCTTGTTCTGGGTGCAAAATTCTCATTTGCTTACTTTTTACAGATCAGACCACTAGTTGAGCCAACAAGAGTGATAGTGAACATGGATAATATTGAATACTCTTGGCATGATCTTGTTTCTAAACAGATATCAAATAGAAATAGGATTTCAAATTTTAAAGCAATAATTCGTAGAATCATGAACTATCTCGAGGTGTTGCAGTTGCTAGAAAATGAGGTTGAGGACTATTTGGATTTGCAGCTGTTGGGAGATGAAGTTGAGGGTTATTTGGAGTAG 1398 0.4013 MVMKLDEAAVQNVFVKSLENYVNWCNYLAIQPVCSSLDSVSREKKMLYVSLYYLIWGEAANVRFLPECLCYIFHHMAREMDEIVRQQIAQPAKSCITQEGVSFLDQVIVPLYDVIAAEAANNDNAKAPHSAWRNYDDFNEYFWSLHCFKLGWPWRLGSPFFQKPLGSKNLLNSSGSRRQGKTSFVEHRTFLHLYHSFHRLWIFLFMMFQGLTLVAFNDGHLNAKTLREVLSLGPTFVVMKFLESTCVLDIFMMYGAYRTTRHLAISRIFLRFSWFGAASVVITFLYVKALLEESKGSGNPIVFRLYVIIIGIYAGVQIFISFLMRIPACHRLTNQCDRWPLIRFVKWMRQERYYVGRGMYERSTDFIKYMLFWLLVLGAKFSFAYFLQIRPLVEPTRVIVNMDNIEYSWHDLVSKQISNRNRISNFKAIIRRIMNYLEVLQLLENEVEDYLDLQLLGDEVEGYLE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0200 465 Coils Coil 433 453 - -
Acco04g0200 465 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 7 421 - -
Acco04g0200 465 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 45 152 IPR026899 -
Acco04g0200 465 SMART FKS1_dom1_2 43 155 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0200 Acco-ChrAcco04 1625641 1639372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0200 4 419 Cell Wall Biosynthesis AT3G07160 68.396 0.0 621