Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0189 ATGGATTACAAGTTTCCCAAGATGGAAATCTCCAAGGAAAAGGAATTTTCGACTTGCTTTAAAGAAACGGCAATTGGAACAAATCCAAACATTAGAGGCTCTCAGACTGTCACTGCTGCTCATCACATTCATGTGGCAAGAGGGATGGATTCAATTTCATCAGAAAAGCTTCTTTCAATTTCAGATTCTACGTCAACAATTGAAGAGCTGACGGGGGCCACTTTTACCAGTCTTCTCTCTCAAAGGTTCACTGATCAAGAGGAAATCACCCAAGTGCAACAGAAAAATCAATTCCTTTCTGAATTCAACCCTATATTTACTCCTCCAAATGCTTCAGCCTCAGGAGCCAGAGAAAGTTTCATTCCTCTAAATCTATTGGAAACACTTCCAGCATTACCAAGAGTAGAATCTGATGAGTCAGCTTCTCCAGCTTCTTCAACTGCTACCTCCAGATTTCCTTATTTGACATTGTTTCTGCAGGAGCCCTCCAGGTTATTTCCATCATCCTCAAAGGTCACTGAGTCACCAGGCATTTCAGACACTTCATTTTCTGTGTTCCAGTGTCATGCAATACAGAGCCAGGAAGTTAAGGAGCCACTCAAAATGAATCAGAATCTCAGAAACTTCAGATCCAAGTCTTTTAATGACTACTGCTTGAGCACCACCAAGACTCAGCCTATGAAGTATTCTGCTGGACGAGGCAAGCTGTTTAAGGGGGTGAGGCAAAGACATTGGGGAAAATGGGTTGCAGAGATTAGACTACCAAGGAATAGAACTAGGGTTTGGCTAGGGACATTTGACACAGCTGAAGATGCAGCCATGGCCTATGACACAGCAGCATACATACTTCGTGGAGAATATGCTCAACTCAACTTTCCAAATCTGAAGCATCATATTAAGGCCAATTCTTTGAATGGAGCAACAGCTGCCCTACTCGAAGCAAAGCTTCAAGCAATATCACAAGGAATTTCTTCTCAAAGAGCGCCCACTGATTCCTTGCCGGGATCATTGGATAAGAAACCTGTTGAGAACGCCAAAATCAACGGTAAAAATCAGAATCCAGCTAAAAAAGAATGGCAGTTTGAGATACAGAACAAGGTTGGAGTTGATGTAAAAAACAATCATCAAGAGATATCGGACATCGAAGCTATTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATTATTTGGGATTCTCTTCTAGTCTCCGATTCATGA 1221 0.4201 MDYKFPKMEISKEKEFSTCFKETAIGTNPNIRGSQTVTAAHHIHVARGMDSISSEKLLSISDSTSTIEELTGATFTSLLSQRFTDQEEITQVQQKNQFLSEFNPIFTPPNASASGARESFIPLNLLETLPALPRVESDESASPASSTATSRFPYLTLFLQEPSRLFPSSSKVTESPGISDTSFSVFQCHAIQSQEVKEPLKMNQNLRNFRSKSFNDYCLSTTKTQPMKYSAGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAMAYDTAAYILRGEYAQLNFPNLKHHIKANSLNGATAALLEAKLQAISQGISSQRAPTDSLPGSLDKKPVENAKINGKNQNPAKKEWQFEIQNKVGVDVKNNHQEISDIEAIQLSRMPSLDMDIIWDSLLVSDS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0189 406 SUPERFAMILY DNA-binding domain 236 293 IPR016177 GO:0003677
Acco04g0189 406 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 100 401 - -
Acco04g0189 406 FunFam Ethylene-responsive transcription factor 2 235 294 - -
Acco04g0189 406 Gene3D AP2/ERF domain 236 294 IPR036955 GO:0003700|GO:0006355
Acco04g0189 406 Pfam AP2 domain 237 285 IPR001471 GO:0003700|GO:0006355
Acco04g0189 406 SMART rav1_2 236 299 IPR001471 GO:0003700|GO:0006355
Acco04g0189 406 CDD AP2 235 295 IPR001471 GO:0003700|GO:0006355
Acco04g0189 406 ProSiteProfiles AP2/ERF domain profile. 236 293 IPR001471 GO:0003700|GO:0006355
Acco04g0189 406 MobiDBLite consensus disorder prediction 323 356 - -
Acco04g0189 406 PRINTS Ethylene responsive element binding protein signature 259 275 IPR001471 GO:0003700|GO:0006355
Acco04g0189 406 PRINTS Ethylene responsive element binding protein signature 237 248 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0189 Acco-ChrAcco04 1523757 1524977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0189 121 401 AP2-EREBP Transcription Factor Family AT4G13620 45.517 3.51e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco04g0189 AP2 4e-13 CL0081