Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0186 ATGCAGCTCAAGCATCTCTGCATCGTTTTACCTGCAGATTCTTCTGAGTTTAAGCAACACCCCCCATCAAAAGTCAACCAATCTTCCCAGAAAGAAACCAAGACAAAGACAAAGACAAAGAAACAACACAGGGCCTGTGGTGGTCAAGTTATTGCCTTCTTTCGTGATTCTGTGAGCAAATTGTATGACACAAACTGTTCGAGGTTTTTCAACAATGAAGTAGGGAAAGGGAACCAAGGCTCAGTCATGCTGTTTCATGACATGGATGGAGTACAACTCTCTGCAAGGATTGGTGGGGACAGCCCAAGAATCTTCAGCTTCGCTGAGCTTTTCATAGGGTCTAATGGTTTCAGTGAGGATCATGTTCTGGGAAGTGGAGGGTTTGGGAGAGTGTACAAGGCTGTTTTGCCCAGTGATGGAACAGTGGTTGCTGTCAAATGTTGCTTAGCAGAGAAAGGCCAGCATTTTGAGAAGACTTTTGCTGCTGAGTTAGCAGCCGTGGCTCATCTTCGACACAAGAACCTTGTCAGGCTCAGGGGTTGGTGTGTTCATGAAGATCAGTTGTACCTTGTCTATGATTACATGCCTAACCTCAGCCTTGACCGTATACTCTTTCGCCGGCCGGAGAGTCCAGACTCTGAGCCTCTCAGCTGGGGAAGGCGTGGGAAGATTATCAAAGGCTTGGCAGCTGCATTATACTATCTTCATGAGCAGCTAGAGAATCAGATCATTCACAGGGATGTGAAAACCAGCAATGTGATGCTTGATTCCCAGTACAATGCCCGGTTGGGTGACTTTGGCCTGGCAAGGTGGCTAGAACATGAACTTGAGTATAACAATAATCAAAGTAGGAAAACATCAACCAAAATTGACCCTTTCAGGTTGGCTGAGACAACAAGAATTGGTGGCACAATTGGGTATTTGCCCCCCGAGAGTTTCCAGAAGAAAAGCATCGCTACCTCGAAATCTGATGTGTTCAGCTTCGGTATAGTTGTGCTGGAAGTGGCATCTGGAAGGAGAGCTATTGATCTTGCATACCCTGATGATAAGATCATTTTGCTCGACTTTGTTAGGAGGCTATCTGATGAAGGGAAGCTGCTAGCAGTAGGCGATTCTCGGCTACCAGATGGTTCCTACAAGCTTTCTGATATGGAACATTTACTTCACGTTGGCCTTCTTTGTACACTCAATGAACCACAATCAAGGCCTAGCATGAGATGGATTGTAGAAGCACTTTCTGACATTTCAAGCCCATTACCAGCTCTTCCTTCTTTCCATTCCCACCCTTTATATATTACTTTATCTTCTCCATCTGATACAAGTCTAAGCAGCACAAATGCCTCCAGCACTGCCAACACAGAAAATGTCAGCATAATCACCAACTATTCTTCATCCAACTATGTTACAGCAAATGGGAGGACAATATACATGACTGCTGAAGATAGAAACAGCGGAATCTCCTCCGCAAAGTGCATGTATCACCAAAACACATCATTTCCTGTGGTTGAAGCTCCGAGGGAGATATCATACAAGGACCTTGCCATGGCTACAGATCATTTTTCTGAGTCTAAGAAGGTAGCAGAGCTGGACTTTGGAACTGCTTACCATGGCATCCTTGGTGATCGTTGCCATGTCATGGTGAAACGCCTTGGAATGAAGACGTGCCCTGCGCTGCGCGAAAGATTCTCTAATGAACTGCGAAATATAGCAAGGCTTCGCCACAGGAATTTGGTGCAGCTTCGAGGTTGGTGTACCGAGCAAGGGGAAATGCTTGTTGTGTATGATTACTCAGCAACAAGACTTCTCAGTCACCATCTTCTCCATCATAACAATGCTAAAGATGGGAGTTCTGTCCTGAAATGGCATCACAGATACGATATAATAAAATCACTAGCTTCTGCCATTCTTTACCTTCATGAGGAATGGGAAGAACATGTAATTCATAGGAACATCACTTCTTCAGCTGTTGTCCTTGAGCCCGATATGAACCCAAGACTCAGCAGTTTTGCCCTGGCTGAATTTTTGACCCGGAATGAGCATGGACATCATATAGTCAAAGACACCAACAAGTCGGTTCGAGGGATTTTCGGCTACATGTCACCGGAATATATAGAATCCGGTGAAGCTACCTCTGCTGCTGATGTTTACAGTTTTGGTGTGGTGATGCTTGAAGTTATCAGTGGACAGATGGCAGTGGACTTCCGGCAGCCTGAGGTGCTATTGGTGAAGAAGGTTCATGAATTTGAGACAAGAAAAAGACCACTGGAGAATTTAGCAGACATAAGGCTCAGTGGAGAGTACAATCACAAAGAACTGATGAGATTAGTGAAGTTAGGAATTGCATGCACCCGATCTGACCCAAAGTTAAGACCGAACATGAGACAAATAGTAAGCATCCTTGATGGAAATGACAGATTGATCATGGAAAAAAACCAGAAAGAGAGCACAGAAGACTGGAAAGAAAGGAATGCATATTCGTTGTCACTGATTAGGAGAATCCAAGCTCTAGGAATCCGCTGA 2520 0.4476 MQLKHLCIVLPADSSEFKQHPPSKVNQSSQKETKTKTKTKKQHRACGGQVIAFFRDSVSKLYDTNCSRFFNNEVGKGNQGSVMLFHDMDGVQLSARIGGDSPRIFSFAELFIGSNGFSEDHVLGSGGFGRVYKAVLPSDGTVVAVKCCLAEKGQHFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRPESPDSEPLSWGRRGKIIKGLAAALYYLHEQLENQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYNNNQSRKTSTKIDPFRLAETTRIGGTIGYLPPESFQKKSIATSKSDVFSFGIVVLEVASGRRAIDLAYPDDKIILLDFVRRLSDEGKLLAVGDSRLPDGSYKLSDMEHLLHVGLLCTLNEPQSRPSMRWIVEALSDISSPLPALPSFHSHPLYITLSSPSDTSLSSTNASSTANTENVSIITNYSSSNYVTANGRTIYMTAEDRNSGISSAKCMYHQNTSFPVVEAPREISYKDLAMATDHFSESKKVAELDFGTAYHGILGDRCHVMVKRLGMKTCPALRERFSNELRNIARLRHRNLVQLRGWCTEQGEMLVVYDYSATRLLSHHLLHHNNAKDGSSVLKWHHRYDIIKSLASAILYLHEEWEEHVIHRNITSSAVVLEPDMNPRLSSFALAEFLTRNEHGHHIVKDTNKSVRGIFGYMSPEYIESGEATSAADVYSFGVVMLEVISGQMAVDFRQPEVLLVKKVHEFETRKRPLENLADIRLSGEYNHKELMRLVKLGIACTRSDPKLRPNMRQIVSILDGNDRLIMEKNQKESTEDWKERNAYSLSLIRRIQALGIR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0186 839 Gene3D Phosphorylase Kinase; domain 1 482 596 - -
Acco04g0186 839 Pfam Protein kinase domain 118 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0186 839 SMART serkin_6 117 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0186 839 FunFam Receptor like protein kinase S.2 598 824 - -
Acco04g0186 839 FunFam Receptor like protein kinase S.2 195 418 - -
Acco04g0186 839 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Acco04g0186 839 Pfam Protein tyrosine and serine/threonine kinase 524 800 IPR001245 GO:0004672|GO:0006468
Acco04g0186 839 ProSiteProfiles Protein kinase domain profile. 117 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0186 839 Gene3D Transferase(Phosphotransferase) domain 1 601 826 - -
Acco04g0186 839 FunFam Receptor like protein kinase S.2 91 194 - -
Acco04g0186 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Acco04g0186 839 SUPERFAMILY Protein kinase-like (PK-like) 101 445 IPR011009 -
Acco04g0186 839 Gene3D Phosphorylase Kinase; domain 1 91 194 - -
Acco04g0186 839 SUPERFAMILY Protein kinase-like (PK-like) 497 801 IPR011009 -
Acco04g0186 839 ProSiteProfiles Protein kinase domain profile. 520 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0186 839 Gene3D Transferase(Phosphotransferase) domain 1 195 417 - -
Acco04g0186 839 PANTHER - 81 414 - -
Acco04g0186 839 MobiDBLite consensus disorder prediction 17 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0186 Acco-ChrAcco04 1500768 1503287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0186 504 803 Receptor kinase-like Gene Family AT5G59270 38.206 4.59e-58 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco04g0186 PK_Tyr_Ser-Thr 2.9e-30 CL0016