Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0172 ATGATGTTATTGTCAGAATCACCAAGATTGGTTGTGAAGAAGGTTTTAGCCAAATGTCTCCAGGAATCCCATGGAGCTATCCTCAGAGGCTTTACTGGAAGGTATGTACTGACTCCACCGGGAGGATTTCCCGATCACCCCCACAGAGGTTTCGAGGCTCTCACCTACGTGCTGCAGGGAGCCATAAGGTATGAAGATTTCGGTGAACACAATGGCACTTTAAGAACCGGTGACGTTCAGGGTTTTAGCCGGAGAAGCATTAGGGGTGAAAGCTCCGGTGCACAGCAAGACGCCGATTATGTTGGTGGACGTGACAGTGAAGCCAAGTTCACAAGTGCATTTCAGATCCCTGCGTCGGGGTGGAACTACTTGGTGTATGTGATCGAGGGAGAAGCGGTGGTGGGGAGTGAGTCGGCGGAGGCAATAACGGCGGAGGAGGTGGCGGTGCTAGGGGGAGGAGATGGGGTCAGCGTGTGGAACAAGTCGGAGAAAAAGACGGTGAGGATGGTGGTGCTAGGCGGAGAGGCGGTGAAGGAAAAGGTGGCTCAGAGGGGACCATTTGTGATGAACACAGAATCAGAGATAGAGGAGGCCATGGACGACTTTCGTATGTTTAAGAATGGGTTCCAGATGGCTAGCTCTTGGAAATCTAATCATATGAATAATGCCTGA 672 0.5149 MMLLSESPRLVVKKVLAKCLQESHGAILRGFTGRYVLTPPGGFPDHPHRGFEALTYVLQGAIRYEDFGEHNGTLRTGDVQGFSRRSIRGESSGAQQDADYVGGRDSEAKFTSAFQIPASGWNYLVYVIEGEAVVGSESAEAITAEEVAVLGGGDGVSVWNKSEKKTVRMVVLGGEAVKEKVAQRGPFVMNTESEIEEAMDDFRMFKNGFQMASSWKSNHMNNA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0172 223 Gene3D Jelly Rolls 19 84 IPR014710 -
Acco04g0172 223 Pfam Pirin C-terminal cupin domain 111 207 IPR008778 -
Acco04g0172 223 Gene3D Jelly Rolls 178 203 IPR014710 -
Acco04g0172 223 Gene3D Jelly Rolls 113 177 IPR014710 -
Acco04g0172 223 MobiDBLite consensus disorder prediction 78 100 - -
Acco04g0172 223 Pfam Pirin 41 81 IPR003829 -
Acco04g0172 223 SUPERFAMILY RmlC-like cupins 36 217 IPR011051 -
Acco04g0172 223 PANTHER PIRIN-RELATED 6 80 IPR012093 -
Acco04g0172 223 MobiDBLite consensus disorder prediction 78 93 - -
Acco04g0172 223 CDD cupin_pirin_C 105 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0172 Acco-ChrAcco04 1373932 1375475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0172 8 212 Calmodulin-binding Proteins AT3G59220 34.532 1.35e-37 130