Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0171 ATGTCCAAACCTAAAGGGATCACACGCATAAGGAACATTTTGGGGTTCAATAGCAGAAAATCTGTCACTTCTGTTAGAAATATCATCATGTCTCAGTCAGATGAATCGCCTGTTTTTAGCAAACCCAGATTGGTACTCAAGAAGGTGCTTGCCAGAAATGTAAATCATGGAAGTCGTCTAATGGTGAACAAGAACATTGCAAGTGAGTTCAATGGTTTGGATCCTTTTCTGAATCTGGATCACTTTTCAGTGACTCACCCTGCAGGATTCAGTGATCATCCACATAGAGGGTTTGAGACCGTCACCTATATGCTAGAGGGAGCATTAGTTCATCAAGATTTTATTGGCAATAAAGGAACAATAAGAGCTGGTGATGTTCAATGGATGTCCGCAGGCAGAGGGATCATTCACTCTGAGATGCCTGCAGGAGTGGGTAAACACACAGGAGTGCAGCTATGGATCAATCTTTCCAAGAAAGACAAAATGATTGAACCAAGCTATCAAGATCTGCTGAAGGAAAACATTCCAAGAGCAGAGAAAGATGGGGTTGAAGTAACAGTGATAGCAGGTGAAGCATTAGGGGTTAAAGCAGAGACACGCACAAGAACTCCAGCCATGTTTCTTGATTTCAAGCTGAATCCACAAGCCCAATTGCACCACAACATTCCAGAGACTTGGAATTCCTTTGTGTATGTGCTTGAAGGAGAAGGAGTGTTTGGGTCCCCAAGCTCATCACCAATTGGACATTCCAATGTGGTGTTCCTGGGGATTGGAGATGGTGTGAGTGTGTGGAACAAATCTTCTGAGCCACTGAGGTTTCTGCTCATAGCCGGCGAGCCATTAAACGAGCCACTGGCTAAGTATGGTCCTTTTGTTATGAACACGCAGTCTGAGATTGAGCAGGCCATGGAGGACTTTCACTACTGTAAGAATGGTTTTGAGAATGGCAGACATTGGAGGTCTCAGTGA 969 0.4417 MSKPKGITRIRNILGFNSRKSVTSVRNIIMSQSDESPVFSKPRLVLKKVLARNVNHGSRLMVNKNIASEFNGLDPFLNLDHFSVTHPAGFSDHPHRGFETVTYMLEGALVHQDFIGNKGTIRAGDVQWMSAGRGIIHSEMPAGVGKHTGVQLWINLSKKDKMIEPSYQDLLKENIPRAEKDGVEVTVIAGEALGVKAETRTRTPAMFLDFKLNPQAQLHHNIPETWNSFVYVLEGEGVFGSPSSSPIGHSNVVFLGIGDGVSVWNKSSEPLRFLLIAGEPLNEPLAKYGPFVMNTQSEIEQAMEDFHYCKNGFENGRHWRSQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0171 322 CDD cupin_pirin_C 204 280 - -
Acco04g0171 322 SUPERFAMILY RmlC-like cupins 68 320 IPR011051 -
Acco04g0171 322 Pfam Pirin C-terminal cupin domain 207 312 IPR008778 -
Acco04g0171 322 Gene3D Jelly Rolls 68 307 IPR014710 -
Acco04g0171 322 Gene3D Jelly Rolls 176 281 IPR014710 -
Acco04g0171 322 Pfam Pirin 68 154 IPR003829 -
Acco04g0171 322 CDD cupin_pirin_N 69 156 - -
Acco04g0171 322 PANTHER PIRIN-RELATED 30 322 IPR012093 -
Acco04g0171 322 PIRSF Pirin 41 320 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0171 Acco-ChrAcco04 1368130 1369927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0171 40 317 Calmodulin-binding Proteins AT3G59220 56.228 1.37e-107 313