Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0170 ATGAGAGCCATCAGGCACAGCTTTTCACTGTTCAATTGCCGACGACCTTCTTCTTCTTCTTCTCCTTCTTCCACCACCTCTGTACTCTCATCTCTCCCAACTATCATGTCACAATCAGATCAATCTTCGCCTTTCGAATCGCCCAGGTTGGTTTTCAAGAAGGTCTTGGCCAAATCTCAACACGAAGGTGACGGTGCTGTTGTTCGAAGAGCCCTCGGAAGGAGTGAGTTGAAGAGTTTGGATCCATTTCTGATGATGGATCACTTCTCAGTGTCTCCACCTGGAGGTTTCCCTGACCATCCACACAGAGGTTTTGAAACTGTCACATACATGCTGCAGGGAGCCATAACTCATCAAGATTTTGCTGGGCATAAGGGTACAATAGGAACAGGGAACGTCCAGTGGATGACCGCAGGCAGAGGAATAATTCACTCTGAAATGCCTAGCGGAGAAGGAACCCACAAGGGATTGCAGCTATGGATCAATCTATCTTCCAAAGACAAGATGATTGAGCCAAATTATCAAGAACTTCCAAAAGAGGACATACCAGTAGCAGAACAGGATGGGGTTGAGGTGAAAGTTATAGCAGGAGAAGCAATGGGAGTTTCTTCACCAGTTTACACTAGAACCCCAACCATGTTCCTTGATTTCTCAGTCAGCCCAGGAGCTGAATGGCATCAGAAGATTCCAGAATCATGGAACGCCTTTGTTTATGTGATTGAAGGAGAAGGGATTTTCGGGTTACTGAGTTCTTCACCAGTGGCAGCTCACAATGTGCTGGTCTTGACCCTTGGAGATGGCCTAAGTGTGTGGAACCGATCGTCAAAGCCTCTGAGGTTTGTGTTAATTGCAGGCCAGCCACTAAATGAACCAGTGGTTCAGTATGGACCCTTTGTGATGAACACACAGTCGGAGATTGAAAAGACCATAGAGGACTATCAATATTGCAAGAATGGATTTGAGATGGGGAGATATTGGAGATCTCAACAGTAA 993 0.4612 MRAIRHSFSLFNCRRPSSSSSPSSTTSVLSSLPTIMSQSDQSSPFESPRLVFKKVLAKSQHEGDGAVVRRALGRSELKSLDPFLMMDHFSVSPPGGFPDHPHRGFETVTYMLQGAITHQDFAGHKGTIGTGNVQWMTAGRGIIHSEMPSGEGTHKGLQLWINLSSKDKMIEPNYQELPKEDIPVAEQDGVEVKVIAGEAMGVSSPVYTRTPTMFLDFSVSPGAEWHQKIPESWNAFVYVIEGEGIFGLLSSSPVAAHNVLVLTLGDGLSVWNRSSKPLRFVLIAGQPLNEPVVQYGPFVMNTQSEIEKTIEDYQYCKNGFEMGRYWRSQQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0170 330 PIRSF Pirin 47 327 IPR012093 -
Acco04g0170 330 FunFam pirin 62 199 - -
Acco04g0170 330 Gene3D Jelly Rolls 62 314 IPR014710 -
Acco04g0170 330 CDD cupin_pirin_N 66 163 - -
Acco04g0170 330 PANTHER PIRIN-RELATED 36 329 IPR012093 -
Acco04g0170 330 MobiDBLite consensus disorder prediction 13 45 - -
Acco04g0170 330 Gene3D Jelly Rolls 183 288 IPR014710 -
Acco04g0170 330 CDD cupin_pirin_C 211 287 - -
Acco04g0170 330 Pfam Pirin 68 161 IPR003829 -
Acco04g0170 330 Pfam Pirin C-terminal cupin domain 214 319 IPR008778 -
Acco04g0170 330 SUPERFAMILY RmlC-like cupins 49 327 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0170 Acco-ChrAcco04 1363896 1365516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0170 48 324 Calmodulin-binding Proteins AT3G59220 63.799 1.69e-130 372