Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0157 ATGGCGTTTGTTCCCCAACCACAATTAGCCGAAGAAGACACTAGCGTCGACATTCATACCTCCCACGGCACTCCCATTCGTTATCTTCCTCTCGATCGTCTTTATTCTGCCACATCCCCCTGTCGTGTCAGCGCCAGTGGTTCCTCCAACGTTATGTCGAAGAAGGTCAAGGCCCGGAAGCTCAATATTTCCCACTTCGAGTTCGACCCTGATCATAAGAACTCACTTGCTAAGCCCCCTCTTCTTCATGTCTACTCTCGCCGCCTCAAGACGCCCCGACATTCCTCGGAGAGCTTGTCCTTCTTTGATTCTTTGATGCGCCGGGCCGGACCCAGCTCGGATAAAACTGATGATTCTGGCGAGCACCGTGAGAACGGCAATTCTGAGGCTGGGACACTGAAGAAGAGAAGAAAAATTGGGAGCGCGGAATTGGTGAATTTGGGGGTGGATTTGAGCGCATTGGGTACATTTGACGGGCCTCGGCTGAGGGACTGTCGTGGTCATAATGTTACTAATACCAGTGATTGTGACTCTAGTATGAAGAAAAATCGTGCCCCCTTGGAGAATTTTTCAAAGCTATTGCCTGCATCCCGCACTGTGAAGAGATGGGTCAGGTTGACTTTTGATAATGCTGATCCTGAGACACTGGTTGGACTACGATGCAAGGTTTTTTGGCCCATGGATTTGAAATGGTATATTGGTCGAGTCATAGGTTATGATTCAGAAACTAAGATACATCATATTAAATATGAAGATGGCGATGAAGAAAACTTAATTCTCTCGAATGAGAAAATAAGGTTTCATCTTTCCCGTGATGAACTGAAGCAATTAAACTTGAGTAGTTGTAACATTTCTGATTATGATGCGGAAGAGCTTCTTGCCTTGGCAGCAAGTTTAGATAACTGTCAAGAGTTTGATCCCAGTGAAGTCGTATGGGCCAAACTAACAGGTCATGCAATGTGGCCAGCTCTTGTTATGGATGAATCACTTGCTGGGAATTGCAAAGGTTTAAAATTGTCTTCAGGCGGAAGATCCGTTCCTGTTCAATTTTTTGGCACACATGACTTTGCAAGGGTTAGACTGCAGCAGGTGAAATCATTTCTCACAGGACTTCTTTCTCGTCTACACTTGAAGTGCAAGAAACCTCATTTTTTTGAAGGACTAGAAGAGGCAAAAATCTATTTAAGCAAACAGAAGCTTCCTTCTGAGATGCTGCGATCACAGAGAAGATGCAAGGCTGATGGCCCCAGAAATGTACATGGAGAGGATGAAGGATGTACAGATTCAGGTGAAGATTGTTCAGACGATGGGTGGGCCCGTACAGCATTGAAAAACATTGAAACTTCTCCCTATGTAGTAGGAGACTTGAAAATTTTAAGCCTCGGAAGAATTGTTCATGATTTTGCAAATTTTCAAGATGGAACTGTAATCTGGCCAGAGGGCTACATGGCAGTGAGGAAGTTTACTTCAATTACTGACCCAAAAGTTTGCACATCATATAAGATGGAGGTGTTGAGAGATCCTGAGTCAAAGGTTCGACCACTTTTTAGGGTGACGCTGGATGGTGGAGAGCAGTTCAATGGTCCCACAGCATCTGCTTGCTGGAATAAAATATACAAACGGATAAAAAAAATGGAAAAGGGCGCTTCTGATGTTTCCACTGCAGATGGCGGGCTTGTAAGGGACTATAAATCAGGAACTGATATGTTTGGTATTTCCAATCCTAAAGTTGCTAAACTTGTACAGGGATTATATAAATGCAGCGCCTCTTCCACAAAATTAATGTGCAAGATAGGTTCTGGAAGATATAGTGATCTGCCTGTTGGTTATAGGCAGGTTCATATTGACTGGTTTGACCTTGATAAGTGCAATGTGTGTCACATGGATGAGGAATATGAGAACAATCTGTTCCTGCAGTGTGACAAATGTAGAATGATGGTCCATGCCAGATGTTATGGAGAACTAGAACCTTCTAATGGAGTGCTATGGTTGTGTAACCTGTGTCGATCCGGTGCTCCCACGCCCCCACCCCCTTGCTGCTTATGTCCTCTGATAGGAGGTGCAATGAAGCCTACAACAGATGGTCGATGGGCTCATTTGGCATGTGCCATGTGGATACCTGAAACTTGCTTAGCTGATGTCAAGCGGATGGAGCCTATTGATGGGATAAGTAGAATCAGCAGGGACCGCTGGAAGTTGTTATGCAGCATTTGTGGGGTGCCTTATGGTGCTTGCATCCAGTGTTCAAATAATTCTTGTCGAGTGGCATATCATCCACTTTGTGCCCGGGCTGCTGGTCTGTGTGTTGAGCTTGAGAATGAGGACAGACTCTATCTACTTTCCGTTGATGATGATGAAGATCAGTGCATTCGCTTGCTCTCTTTCTGCAAGAGACATAGGCATCCATCGAATGATCATTCTATTTCTGATGAACGCATTGGGCGAGTTGCCAGTCAATGTTCAGAATATAAACCACCACCCAACCCATCCGGTTGTGCTCGCAGTGAACCATACAATAACATTGGCAGGAGAGGGCGTAAAGAACCTGAAGCACTTGCAGCAGCGTCCTTAAAACGCTTGTTTGTAGAAAATCAATCTTATTTGGTTGGTGGACATTGCCAACATGGAGTGTCAGAAAATGTAGAGCCATCAGGAAGGGGAGTTTGCTCTAAGTTCTTTTGCAGCCAGCAAAGGTTGAAGACCTCTCTGGTTGATGCTTCCAATGGCATACTTTCTATTGCTGAGAAATATGTATACATGAGGGAAACCTTTAGGAAACAGCTTGCATTTGGGAAATCTAGAATTCATGGATTTGGCATCTTTGCAAAACATCCTTATAAAGGCGGTGACATGGTGATTGAATACACCGGCGAACTTGTTAGACCTTCCATAGCTGACCGGAGAGAGCACTTTATATATAATTCTTTGGTTGGTGCTGGAACATACATGTTTCGAATTGATGATGAACGAGTTATTGATGCTACCAGAGCAGGGAGCATTGCTCATTTGATTAATCATTCTTGTGCACCAAATTGCTACTCAAGAGTTATCAATGTTAATGGTGATGATCATATAATAATATTTGCAAAGAGGGACATTAAACAGTGGGAGGAGCTCACATATGATTATAGGTTTTTTTCAATTGATGAGCGACTTGCTTGTTATTGTGGCTTCCCAAGATGCCGAGGTGTTGTAAATGATACAGAGGCAGAAGAGCGAGCTGCAAAGCTATCTGTACCTCGGAGTGAATTAATTGATTGGGAAGGAGAATAA 3273 0.4397 MAFVPQPQLAEEDTSVDIHTSHGTPIRYLPLDRLYSATSPCRVSASGSSNVMSKKVKARKLNISHFEFDPDHKNSLAKPPLLHVYSRRLKTPRHSSESLSFFDSLMRRAGPSSDKTDDSGEHRENGNSEAGTLKKRRKIGSAELVNLGVDLSALGTFDGPRLRDCRGHNVTNTSDCDSSMKKNRAPLENFSKLLPASRTVKRWVRLTFDNADPETLVGLRCKVFWPMDLKWYIGRVIGYDSETKIHHIKYEDGDEENLILSNEKIRFHLSRDELKQLNLSSCNISDYDAEELLALAASLDNCQEFDPSEVVWAKLTGHAMWPALVMDESLAGNCKGLKLSSGGRSVPVQFFGTHDFARVRLQQVKSFLTGLLSRLHLKCKKPHFFEGLEEAKIYLSKQKLPSEMLRSQRRCKADGPRNVHGEDEGCTDSGEDCSDDGWARTALKNIETSPYVVGDLKILSLGRIVHDFANFQDGTVIWPEGYMAVRKFTSITDPKVCTSYKMEVLRDPESKVRPLFRVTLDGGEQFNGPTASACWNKIYKRIKKMEKGASDVSTADGGLVRDYKSGTDMFGISNPKVAKLVQGLYKCSASSTKLMCKIGSGRYSDLPVGYRQVHIDWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGELEPSNGVLWLCNLCRSGAPTPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKRMEPIDGISRISRDRWKLLCSICGVPYGACIQCSNNSCRVAYHPLCARAAGLCVELENEDRLYLLSVDDDEDQCIRLLSFCKRHRHPSNDHSISDERIGRVASQCSEYKPPPNPSGCARSEPYNNIGRRGRKEPEALAAASLKRLFVENQSYLVGGHCQHGVSENVEPSGRGVCSKFFCSQQRLKTSLVDASNGILSIAEKYVYMRETFRKQLAFGKSRIHGFGIFAKHPYKGGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCAPNCYSRVINVNGDDHIIIFAKRDIKQWEELTYDYRFFSIDERLACYCGFPRCRGVVNDTEAEERAAKLSVPRSELIDWEGE 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0157 1090 MobiDBLite consensus disorder prediction 110 134 - -
Acco04g0157 1090 Gene3D - 214 267 - -
Acco04g0157 1090 CDD SET_SETD1-like 914 1062 - -
Acco04g0157 1090 CDD PHD_ATX1_2_like 622 668 IPR042010 -
Acco04g0157 1090 ProSiteProfiles FYR domain FYRN motif profile. 448 507 IPR003888 GO:0005634
Acco04g0157 1090 ProSitePatterns Zinc finger PHD-type signature. 623 668 IPR019786 -
Acco04g0157 1090 PANTHER PHD FINGER PROTEINS 39 1078 - -
Acco04g0157 1090 CDD PWWP_AtATX1-like 307 401 - -
Acco04g0157 1090 SUPERFAMILY FYVE/PHD zinc finger 613 687 IPR011011 -
Acco04g0157 1090 ProSiteProfiles SET domain profile. 926 1044 IPR001214 GO:0005515
Acco04g0157 1090 SMART TUDOR_7 213 271 IPR002999 -
Acco04g0157 1090 SMART fyrn_3 463 507 IPR003888 GO:0005634
Acco04g0157 1090 FunFam Histone-lysine N-methyltransferase 859 1083 - -
Acco04g0157 1090 Pfam F/Y-rich N-terminus 454 504 IPR003888 GO:0005634
Acco04g0157 1090 CDD ePHD_ATX1_2_like 685 799 IPR041956 -
Acco04g0157 1090 MobiDBLite consensus disorder prediction 102 134 - -
Acco04g0157 1090 Gene3D - 449 589 - -
Acco04g0157 1090 Pfam SET domain 937 1043 IPR001214 GO:0005515
Acco04g0157 1090 Pfam PHD-zinc-finger like domain 678 799 - -
Acco04g0157 1090 SUPERFAMILY Tudor/PWWP/MBT 301 400 - -
Acco04g0157 1090 SMART fyrc_3 515 595 IPR003889 GO:0005634
Acco04g0157 1090 Pfam PHD-finger 635 669 - -
Acco04g0157 1090 FunFam Histone-lysine N-methyltransferase 674 802 - -
Acco04g0157 1090 ProSiteProfiles Zinc finger PHD-type profile. 620 671 IPR019787 -
Acco04g0157 1090 ProSiteProfiles Post-SET domain profile. 1050 1066 IPR003616 -
Acco04g0157 1090 SMART PWWP_4 305 369 IPR000313 -
Acco04g0157 1090 Pfam PWWP domain 309 394 IPR000313 -
Acco04g0157 1090 Pfam F/Y rich C-terminus 513 586 IPR003889 GO:0005634
Acco04g0157 1090 SUPERFAMILY SET domain 918 1066 IPR046341 -
Acco04g0157 1090 CDD Tudor_Agenet_AtEML-like 217 267 - -
Acco04g0157 1090 Gene3D SET domain 827 1081 IPR046341 -
Acco04g0157 1090 ProSiteProfiles FYR domain FYRC motif profile. 511 597 IPR003889 GO:0005634
Acco04g0157 1090 ProSiteProfiles Extended PHD (ePHD) domain profile. 676 800 IPR034732 -
Acco04g0157 1090 ProSiteProfiles PWWP domain profile. 307 370 IPR000313 -
Acco04g0157 1090 SMART set_7 926 1050 IPR001214 GO:0005515
Acco04g0157 1090 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 614 673 IPR013083 -
Acco04g0157 1090 MobiDBLite consensus disorder prediction 411 433 - -
Acco04g0157 1090 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 674 802 IPR013083 -
Acco04g0157 1090 SMART PHD_3 734 800 IPR001965 -
Acco04g0157 1090 SMART PHD_3 622 669 IPR001965 -
Acco04g0157 1090 Gene3D - 296 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0157 Acco-ChrAcco04 1293012 1302964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0157 598 770 C2H2 Transcription Factor Family AT3G14740 38.068 6.32e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco04g0157 zf-HC5HC2H_2 4.1e-33 CL0390