Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0154 ATGACACAGGCTTTAGCCACTGCGTTGCTGCTGAAAGAGAAGGAAGAGGCACCGGTTATAGCAAACCGGTTAGAGGCTGCCGATACAGTGGTGGACGTTGGGGGTGCAGACTGTTTTGCCGGTCTAGAATGCTTTCTGAACATTGTCAGGGCACTGGGAATGGGATCATGCCTCTCGGTGGCCCATCCCCTCCCTTACTCGCCGGAATCCACTTCAGAAAGTGCGAAGCGAAGGAGGAAATTAAGGAGCAGCTCTTCGTTTGATTCTAAGACGGAATTGGGCCTACATAAAATCCCTGGGAGAATGTTCGTAAATGGATCCAGTGAGATCGCGTCCCTGTTTTGTAAGCAAGGCAAGAAAGGGATCAACCAGGACGCCATGCTTGTTTGGGAGAACTTCTGTACAAAGGACGCCATTTTTTGTGGAGTTTTTGATGGCCATGGTCCTAGTGGTCATAGGGTAGCAAAGAGAGTCAGGGATTCCTTCCCTTTAAAGCTTATTGCCCAATGGGAATTGCATCATAACAATAAGGATGGACTAAGTGACAACAGGAATCCTATGGCTATGGCAAACCATAAATCAGAGGATATTGGATTCAAAATGGTTGGTGAGAAATCTAGTCTTACTGATCAAGAGCACAACTGTACCAATACTATGAAGGCGCTGAAGGAATCTTTTCTGAAGGCTTGCAAGATTATGGACAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGTGGGACAACTGCAGTCACCTTGGTCAAACAGGGGCAAGATCTTGTTATTGGAAATGTTGGGGATTCAAGAGCTATATTGGGTACTAGGGATCATGATAATTCTCTTATTGCTGTTCAGTTGACCATTGACTTGAAGCCAAATCTTCCAAGGGAAGAAGAGAGAATCAAGCGGTGTAGAGGACGTGTATTTGCTCTTCGCAATGAACCTGAGGTTGCTCGAGTTTGGCTGCCCAATGCTGACTCCCCAGGCCTTGCTATGGCACGAGCTTTTGGAGATTTTATTCTTAAAGACTTTGGTCTGATATCTGTTCCTGATATCTCCCATCACCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCCACAGATGGGATTTGGGATGTTTTGTCGAACCAAGAAGTTGTGGACATTGTGGCTTCTGTGTCACGCTCTTCCGCAGCTCGAACACTTGTTGAGACTGCTGTTCGAGCATGGAGAACAAAGTACCCGACTTCAAAAATTGATGATTGTGCTGTAGTGTGTCTCTTTTTTGATTCAGATTCAGACTTAAAGACAGTTTACTCCACACACAAGGAGATGCCCGAGGCATCGACTAATCACCAATCTGAGGGATCTGCTCCTCAAACTGGAGTTAACTGTTCAGAAAAGTCTATTGCTTCCCCTGAGAATGTTCCTATGCTTGGGAAAAAAGGAGATGGAGTAGAAGCTGTACAGCAGCAGTAG 1467 0.4554 MTQALATALLLKEKEEAPVIANRLEAADTVVDVGGADCFAGLECFLNIVRALGMGSCLSVAHPLPYSPESTSESAKRRRKLRSSSSFDSKTELGLHKIPGRMFVNGSSEIASLFCKQGKKGINQDAMLVWENFCTKDAIFCGVFDGHGPSGHRVAKRVRDSFPLKLIAQWELHHNNKDGLSDNRNPMAMANHKSEDIGFKMVGEKSSLTDQEHNCTNTMKALKESFLKACKIMDKELKLHPDIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAILGTRDHDNSLIAVQLTIDLKPNLPREEERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDFILKDFGLISVPDISHHRLTEKDEFVVLATDGIWDVLSNQEVVDIVASVSRSSAARTLVETAVRAWRTKYPTSKIDDCAVVCLFFDSDSDLKTVYSTHKEMPEASTNHQSEGSAPQTGVNCSEKSIASPENVPMLGKKGDGVEAVQQQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0154 488 Pfam Protein phosphatase 2C 207 408 IPR001932 -
Acco04g0154 488 SMART PP2C_4 102 423 IPR001932 -
Acco04g0154 488 Gene3D - 106 427 IPR036457 -
Acco04g0154 488 MobiDBLite consensus disorder prediction 440 467 - -
Acco04g0154 488 SUPERFAMILY PP2C-like 111 426 IPR036457 -
Acco04g0154 488 ProSiteProfiles PPM-type phosphatase domain profile. 110 425 IPR001932 -
Acco04g0154 488 MobiDBLite consensus disorder prediction 65 88 - -
Acco04g0154 488 MobiDBLite consensus disorder prediction 440 488 - -
Acco04g0154 488 CDD PP2Cc 110 425 IPR001932 -
Acco04g0154 488 PANTHER PROTEIN PHOSPHATASE 86 423 IPR015655 GO:0004722|GO:0006470
Acco04g0154 488 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0154 Acco-ChrAcco04 1250248 1252778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0154 54 427 PP2C-type Phosphatase Gene Family AT3G02750 56.512 2.48e-153 445