Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0139 ATGATGTTGAAATCTGTTAAGGAAAGCCTTAGGAGCCTTGGATCAAAGCATGTGCAGAAGAAGAAGAAGAAGGATCAATCAGTGAATGGTGTTCAGTGCTCAAACTGCAACGAAGTGTGCTTAGAGCTCAGCAACAACGACCAATGCTATAAACGTGAGGATGGAAACAAAACAGCTGATGAGGCTGAACCCAACAGTTCTTTTGCTCATTCTGTCATCAATATGGTTGGTATGCTCACAGGGTTGGGGCAATTATCAGCGTCATGTGCAGTAGAAGAGGGAGGGTGGGCATGTGCAGTAATATTCCTCGTAGGCCTTGCAATCACGTGTGCTTATAGCTGTCGTCTTCTTGGAAAATGCATGACCAAAAACCCTAAGCTCCAAAGCTACGCAGATATAGGTGAACAAGCCTTTGGAAAAAAAGGAAGAATGGTTGCATCAACCCTAATCTACACAGAGATCTTCATGGCCCTTGTCTCCTACACCATCTCACTACACGACAACTTGTTCACTGTCTTCATGGGATCTCATCACCTTAACCATTTGCGTCTTCCTAAGTTACTGTCACCTTCTCAGCTTCTCACTGTTCTTGCTGTTCTTATTGCTTTGCCTAGCTTGTGGCTTACAGACCTTTCTTCTATTTCTTTCCTTTCCTCTGCTGGTGTTCTCATGTCTCTTGTTATTTTCTTGTCTGTGGCTGTCACCCCCATTTTCGGAGGCGTTAAGGTTAACCGACACATCCCAGTTCTTCAGATCCATAATGTCCCTTCTGTTTCTGGCCTCTTCATTTACAGCTTTGGCGGACACGTCGTGTTCCCTAATCTCCATAAATCTATGAAGGACCCCTCCAAGTTCACCAAGGTGATAATAGTGAGCTTCTCAATAGCCACACTATTGTTTACCTCGCTGGGATTCATGGGAGCGAAGATGTTCGGGCCACAAGTAAAGTCACAGATCACTCTAAGCTTGCCAGAGAATTTCATAGTAACCAAGATAGCAGTGTGGGCGACAGTGATAACACCAATGACCAAATATGCTCTTGAGTTCGCACCATTTGCGATTCAGCTACAGCAAAGGCTGCCCAGTTCTATGAGTCACAGAAGCAAGATGGTGATAAGAGGCACCGTGGGTTCAGTGCTGCTACTGGTGATTCTAGCATTAGCTCTTTCTGTGCCTTATTTTGAGGACGTACTTAGTCTCACAGGCTCGCTTTTGACAGTTTTCATAAGCTTGATATTTCCTTGTGCTTTCTACATTAAGATCTGTTGGGGACAAATACCAAACACTGTCTTAGTATTTAACTTGTGTCTCATAGCTTTAGGGCTAGTCCTTGGAGTCATGGGCACCATCTCTTCCTGCACCTCACTCCTCAACAATCTTCATGCTCATCACTGA 1395 0.4459 MMLKSVKESLRSLGSKHVQKKKKKDQSVNGVQCSNCNEVCLELSNNDQCYKREDGNKTADEAEPNSSFAHSVINMVGMLTGLGQLSASCAVEEGGWACAVIFLVGLAITCAYSCRLLGKCMTKNPKLQSYADIGEQAFGKKGRMVASTLIYTEIFMALVSYTISLHDNLFTVFMGSHHLNHLRLPKLLSPSQLLTVLAVLIALPSLWLTDLSSISFLSSAGVLMSLVIFLSVAVTPIFGGVKVNRHIPVLQIHNVPSVSGLFIYSFGGHVVFPNLHKSMKDPSKFTKVIIVSFSIATLLFTSLGFMGAKMFGPQVKSQITLSLPENFIVTKIAVWATVITPMTKYALEFAPFAIQLQQRLPSSMSHRSKMVIRGTVGSVLLLVILALALSVPYFEDVLSLTGSLLTVFISLIFPCAFYIKICWGQIPNTVLVFNLCLIALGLVLGVMGTISSCTSLLNNLHAHH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0139 464 PANTHER AMINO ACID TRANSPORTER 57 449 - -
Acco04g0139 464 Pfam Transmembrane amino acid transporter protein 65 451 IPR013057 -
Acco04g0139 464 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0139 Acco-ChrAcco04 1160757 1163968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0139 40 464 Amino Acid or Auxin Permease AAAP Family AT5G16740 56.573 4.08e-155 445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0139 04 1160757 1163968 Acco04g0139 04 1160757 1163968 ECH