Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0122 ATGTCATATCATGGTTTGGTTCACTTTACCAGCTGCCCCAATTTGATGGTATGGATGATCCTGTTTAGCCTTTCCAATTTCTTTAAATATAAAATAAAGAGAGTGAATTGCTTTTGTTTATTTTCTCGAGTGATAGTGAAGGAAGTAAATAGAGAGAGAGAGATCAAAGAAAATCAGAGAGCGTACGTTAAAGCTATTATCAGAATTGGTGATGAACAATCCAATATCAGGACTTGGTTGATTGTTGAAGTGCAGCTTTCAGAATCAGAAGGAGGAGGAGGAGGAGCTTGGTATGATGGATGTAATCGGACGCCAAGGAGGACGAGGAGGAGGAACGAGAGACTCAAGTTCCTGGCTAAAATGGCGAATCTGGCAAGTCCGGCTCCCATAATTTACCATCTCCACTTCAAACGCAGTACAATAGCGAAACCTTGCGACCCCGTCTTCCATAAATTCTTCCCCAAGTTCCCTTCTCTCCTCACTCAAATCGGCCTGTCTCCTGTTCGCAGCTCATCAACTGATACATTTTCACAAAGTGCTTCCCTACAGCACAAAACCCTTCTTGTTGAGACTTACCATGAGCATCGCATCCTCAAATCCTTATTGCTAAAGCTTCAGGAGCAAGATTCAAGCCCTCTCCTCATACTCCAACAAGATGGAGATTGGTCCAAAGACCAGTTCTGGGCTGTCGTCAGGTTTCTTAAACGTGCCTCCAGATCCAAAGAAATCCTTCAGGTATTTGATGTGTGGAAGAAAATTGAGGAATCACGGATTAATGAAGTCAACTATTACAAAATAATACGTGTGTTGACTGAAGAAGGAATGATGGAAGAGGCTGTGGCTGCCCTGCAGGAGATGAAAAATTATGGTCTCAAACCTTCTTCAGGTGCGTACAATCCAATAATTCATGGTTTCTCCATGGAAGGCAAATTCAATGATGCTTTGTTTTTTCTAAGTGAGATGAAAGCATCCGGCGTATTGCCGGACGCCGAAGCCTATGATGGTTTAATTCAAGGTTATGGGAAGTTTAAGATGTATGATGAGATGGGCTCGTGTGTGAAAATGATGGAGTTGGATGGATGTTCTCTAAGTCACACGACTTATAACATACTTATAAGAGAATATTCAAAAGCTGGACTACTTCATAGAATGAAATCTGTATATGTAAGAATGCCTTTCAAAAAAAAGCATTTGGATTCTTCTACTTTGGTTGCAATGCTTGAGGCTTATGCCAGATTTGGGGTAGTTACTAAGATGGAAAAAATATATCTTAAACTTTTGAACTCACAAACCCCTTTAAAGGATGATTTAATAAGAAAACTTGCAGAAGTTTATATTGAGAATCATATGTATTCTAGAGTAGAAGATTTGGGGATTGATTTACGTTCGACTTCTGGTGGGACTGAACTTGTTTGGTTTCTGTGCCTCCTTTCTCATGCTTGTCTTTTGAGTCGAAAAGGCATGGATATCATTGTTGAAGAAATGCAGGAAGCCGGAGTTCAATGGAATGTTACACATGCTAATATTATCATACTGGCTTATGTGAAGATGAATGATTTCAAGCACTTGAAAATTTTTCTTTCTCGATGGTCAACCTATCGAGTGAAGCCTGACATAGTCACTATTGGAATTATTTTTGATGCAACTAGAAAGGGTTTTGATGGCAATAGGATTTGGGAGGAGTGGAGAAGGATGGGCTATCTTCATAGAGTTGTAGAAATGGAAACAGATTCTCTGGTCCTTGCTGCGTTTGGGAAAGGTCATTTTCTTAAGACTTGTGAAGAAGTGTACTCTTCTCTGCACCCAGAGGACAGAGAAAGAAAAACATGGACTTATGAAGGCCTAATTGATGTAGTATCTGAACATATTGAAGGTTGTATCAGCCGTAGGACAACCAAATAA 1902 0.4006 MSYHGLVHFTSCPNLMVWMILFSLSNFFKYKIKRVNCFCLFSRVIVKEVNREREIKENQRAYVKAIIRIGDEQSNIRTWLIVEVQLSESEGGGGGAWYDGCNRTPRRTRRRNERLKFLAKMANLASPAPIIYHLHFKRSTIAKPCDPVFHKFFPKFPSLLTQIGLSPVRSSSTDTFSQSASLQHKTLLVETYHEHRILKSLLLKLQEQDSSPLLILQQDGDWSKDQFWAVVRFLKRASRSKEILQVFDVWKKIEESRINEVNYYKIIRVLTEEGMMEEAVAALQEMKNYGLKPSSGAYNPIIHGFSMEGKFNDALFFLSEMKASGVLPDAEAYDGLIQGYGKFKMYDEMGSCVKMMELDGCSLSHTTYNILIREYSKAGLLHRMKSVYVRMPFKKKHLDSSTLVAMLEAYARFGVVTKMEKIYLKLLNSQTPLKDDLIRKLAEVYIENHMYSRVEDLGIDLRSTSGGTELVWFLCLLSHACLLSRKGMDIIVEEMQEAGVQWNVTHANIIILAYVKMNDFKHLKIFLSRWSTYRVKPDIVTIGIIFDATRKGFDGNRIWEEWRRMGYLHRVVEMETDSLVLAAFGKGHFLKTCEEVYSSLHPEDRERKTWTYEGLIDVVSEHIEGCISRRTTK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0122 633 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 294 328 IPR002885 -
Acco04g0122 633 PANTHER OS08G0520200 PROTEIN 173 622 - -
Acco04g0122 633 Gene3D Tetratricopeptide repeat domain 206 346 IPR011990 GO:0005515
Acco04g0122 633 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 259 293 IPR002885 -
Acco04g0122 633 Gene3D Tetratricopeptide repeat domain 347 431 IPR011990 GO:0005515
Acco04g0122 633 NCBIfam pentatricopeptide repeat 263 294 IPR002885 -
Acco04g0122 633 NCBIfam pentatricopeptide repeat 298 330 IPR002885 -
Acco04g0122 633 NCBIfam pentatricopeptide repeat 367 393 IPR002885 -
Acco04g0122 633 Pfam PPR repeat 266 291 IPR002885 -
Acco04g0122 633 Pfam PPR repeat 367 391 IPR002885 -
Acco04g0122 633 Gene3D Tetratricopeptide repeat domain 451 631 IPR011990 GO:0005515
Acco04g0122 633 Pfam PPR repeat family 293 341 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0122 261 453 Miscellaneous Gene Families AT4G11690 21.762 3.11e-08 54.7