Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0089 ATGCTGAATTTTGCTCGCTCCATGTCATCCTCCAAGCTTTTCATCGGCGGCCTTTCTTATGGAGTTGATGATCAATCTCTCAGAGATGCGTTTGCCAGCTTTGGAGATGTGGTCGAGGCAAGGGTTATAACTGATAGAGACTCTGGAAGGTCAAGAGGGTTTGGATTTGTCAATTACTCCAGTGATGAATCTGCTAGTTCAGCTATTTCTGCAATGGATGGGCAGGAGTTAAATGGGAGAAGCATTCGGGTGAGCTATGCAACTGACAGATCATCTGCACCTCGATCTTTTGGCGGCGGCGGCGGTTTTGGTGGTGGTTACCGTAGGAATGATGGAGGCTTTGACAATTCATCCTTTTAA 360 0.4694 MLNFARSMSSSKLFIGGLSYGVDDQSLRDAFASFGDVVEARVITDRDSGRSRGFGFVNYSSDESASSAISAMDGQELNGRSIRVSYATDRSSAPRSFGGGGGFGGGYRRNDGGFDNSSF 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0089 119 MobiDBLite consensus disorder prediction 90 119 - -
Acco04g0089 119 FunFam Glycine-rich RNA-binding protein 2 1 119 - -
Acco04g0089 119 Gene3D - 4 118 IPR012677 -
Acco04g0089 119 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 89 IPR000504 GO:0003723
Acco04g0089 119 CDD RRM2_NsCP33_like 12 87 - -
Acco04g0089 119 SUPERFAMILY RNA-binding domain, RBD 8 114 IPR035979 GO:0003676
Acco04g0089 119 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 8 108 - -
Acco04g0089 119 SMART rrm1_1 12 85 IPR000504 GO:0003723
Acco04g0089 119 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 83 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0089 Acco-ChrAcco04 817064 818218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0089 11 92 Eukaryotic Initiation Factors Gene Family AT1G49760 30.488 1.38e-07 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0089 04 817064 818218 Acco04g0089 04 817064 818218 ECH