Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0082 ATGAGTTTGAACTGCTTAACAACTTTTAAGGAGTTCGAACTCATAGTCAATGCTTGGGTGAAGGAGGAAGCATCGAGTGTGAAAGGGAAGTCTCCCGAAGTCAATGCTTGGATGAAGAAGGAGGTATTGCCTTCAGGTGAGATTCCGGCGAGAGTTCTCTGGATTTGTGCTGGCACAGGCACGAAGAAGGCTAAACAGAAACAAAGATTGAGACGTTATCGAACAGAGATGCGTTGCCATGTCGTGACTGTTCCCGGAAGCGATTATCGCTTCTTCTCCCCAAAGTCCTTATGTGTCCCTGCCACCACCACCTTCAATCCTAAGTCTCTCAGGTTTCCATCTCGAATTGTCGGTCTCAGAGCTAAAGCCACCGTCAACGACGGCTATGTGGCGGAGGCCTCCAAGTTGAGCTTCTATGAGCTTCTAGGTATACCGGAATCTGGGTCCTTGCTCGAAATCAAACAGGCCTACAAGCAGCTCGCGCGCAAGTACCACCCTGATGTGTCGCCGCCAGATCGGGTGGAGGAATATACCAAGAGGTTCATTCAGGTGCAGGAAGCCTATGAGACCTTGTCCGATCCTGGAAGGAGGGCTATGTATGATGGCGACATGGCCAGAGGGATTCACCTTGCCTTTTCCGCTCGCCGGCGTTACTACGACGATGAGGCAATTGAACAAAAAAGTGAGTGGAAAGCTCGTTGGCAGAGTCAGCTATCACAGCTGAAGAGAAGAAGCGAGGCGAAGGAGAATGGAGAAAATCTGTCGTGGGCTGCTCGAATGCGTTGTCGAAGAGCAGAATCGAGTGACGAGTCCTAA 816 0.5061 MSLNCLTTFKEFELIVNAWVKEEASSVKGKSPEVNAWMKKEVLPSGEIPARVLWICAGTGTKKAKQKQRLRRYRTEMRCHVVTVPGSDYRFFSPKSLCVPATTTFNPKSLRFPSRIVGLRAKATVNDGYVAEASKLSFYELLGIPESGSLLEIKQAYKQLARKYHPDVSPPDRVEEYTKRFIQVQEAYETLSDPGRRAMYDGDMARGIHLAFSARRRYYDDEAIEQKSEWKARWQSQLSQLKRRSEAKENGENLSWAARMRCRRAESSDES 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0082 271 SMART dnaj_3 136 196 IPR001623 -
Acco04g0082 271 FunFam Chaperone protein dnaJ 20, chloroplastic 123 232 - -
Acco04g0082 271 SUPERFAMILY Chaperone J-domain 134 205 IPR036869 -
Acco04g0082 271 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 128 268 - -
Acco04g0082 271 ProSitePatterns Nt-dnaJ domain signature. 181 200 IPR018253 -
Acco04g0082 271 Pfam DnaJ domain 138 201 IPR001623 -
Acco04g0082 271 ProSiteProfiles dnaJ domain profile. 137 204 IPR001623 -
Acco04g0082 271 Gene3D DnaJ domain 125 248 IPR036869 -
Acco04g0082 271 CDD DnaJ 138 193 IPR001623 -
Acco04g0082 271 PRINTS DnaJ domain signature 139 157 IPR001623 -
Acco04g0082 271 PRINTS DnaJ domain signature 176 196 IPR001623 -
Acco04g0082 271 PRINTS DnaJ domain signature 157 172 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0082 Acco-ChrAcco04 756425 758984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0082 133 201 C2H2 Transcription Factor Family AT1G74250 41.667 8.00e-07 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g0082 04 756425 758984 Acco04g0082 04 756425 758984 ECH