Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0058 ATGGACTTACCACTCCTTCTCTTTCTTCTCCTCATTCCTCATTTCGCTTCCTCCGATTTAGCCAAGGACCGCCAAGAGTGCGCCGATCAACTCGTCGGCCTCGCTCCCTGTCTCTCCTACGTCAGCGGCGAGGCCAAAACTCCCACCATCGATTGCTGTACCGGTCTCAAACAGGTCGTCGACAAGAGCAAGAAGTGTCTCTGCCTCCTCATTAAATACCGCAACGAACCCGACCTCGGCTTCACCCTCAACGCCTCCCTCGCCGTCAACCTCCCCTCCGCCTGCCACGTCCCCGCCAACATCTCCCAGTGCGTCGATCTTTTGCATTTGGCTCCTAATTCTTCCGAGGCTAAGGTCTTCGAGGGCTTTGATAAAGGCACTCCCACTAACACTTCCAGTTCCGTCCCACTCGCGCCAGCTGGGAAGGGATCGAGCCCCCCCGGCACGAGCGCCAATGAGAAGAACCGCGGCTTCTCAGTGGCTGTGTGGGAAAAGAGGCGGTTGGTGGCTCAAGTGGCTTGGATTTGGATTATTATTGAACAGCAAGAGTCAACATTAATGATATGGCGTTTATTTACTTGA 582 0.5481 MDLPLLLFLLLIPHFASSDLAKDRQECADQLVGLAPCLSYVSGEAKTPTIDCCTGLKQVVDKSKKCLCLLIKYRNEPDLGFTLNASLAVNLPSACHVPANISQCVDLLHLAPNSSEAKVFEGFDKGTPTNTSSSVPLAPAGKGSSPPGTSANEKNRGFSVAVWEKRRLVAQVAWIWIIIEQQESTLMIWRLFT 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0058 193 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 18 141 IPR043325 -
Acco04g0058 193 CDD AAI_LTSS 34 97 - -
Acco04g0058 193 Gene3D - 24 104 IPR036312 -
Acco04g0058 193 MobiDBLite consensus disorder prediction 125 153 - -
Acco04g0058 193 Pfam Probable lipid transfer 21 104 IPR016140 -
Acco04g0058 193 MobiDBLite consensus disorder prediction 122 153 - -
Acco04g0058 193 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 24 104 - -
Acco04g0058 193 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869|GO:0008289
Acco04g0058 193 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Acco04g0058 193 PRINTS Plant phospholipid transfer protein signature 26 42 IPR000528 GO:0006869|GO:0008289
Acco04g0058 193 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 105 IPR036312 -
Acco04g0058 193 SMART aai_6 27 104 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0058 Acco-ChrAcco04 572022 572908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0058 6 192 Acyl Lipid Metabolism Gene Families AT2G44290 42.932 5.60e-48 154