Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0057 ATGATTTCAGTTGGTGTCACGATGATTTATCTAGCTGTTGATTCTAGATGTTCTGCTTTTGAAGGGGATTGTCGAAAATCCCTGGCTGGTAATTTGGAGATGGGGGTCAAGGCTAAGAAAGCAATGAAGAAGAGTCTGAAAAAGGCCACAGCTAATGCATCTGTTCTGAGCAAGAAAACAGAGGGTGACTTCTTGCCCTTGGAAGGTGGACCTGCATGCAAACTTCCTGAATATAAATTGCCAGAGAACACCACTAATGTGTTATATATTGGTCGCATACCACATGGGTTCTATGAGAAGGAGATGGAAGGATTTTTTGGACAATTTGGTACCATCAAGAGGTTGAGAATTGCAAGAAATAAAAAGACAGGAAAATCTAGACATTTTGGCTTCATACAATTTGAATCTCCTGAGGTGGCAAAAATTGTAGCTGAGACCATGCATAATTATCTGCTTCATGAACATGTTTTGCAGGTTCATCTGATACCTCCAGAGGATGTTCATCCAAAATTATGGAGGGGCTTCAATTACCGGTACAAGCCATTGGACACTGTTCAAATTGAAAGAAAGCGGCTTGGCAAGGAAAGAACATTGGAAGAGCAACAAAAGTTGGTTGAAAAGATCTTGAAGCACGACAAAAAACGACAAAAGAGGATAGAGGCTGCTGGGATTGATTACGAATGCCCTGAGATTGTGGGCACAGTCCGGCCTGGTCCTAAGAAAATAAAGTTTGAAGACTGA 741 0.4143 MISVGVTMIYLAVDSRCSAFEGDCRKSLAGNLEMGVKAKKAMKKSLKKATANASVLSKKTEGDFLPLEGGPACKLPEYKLPENTTNVLYIGRIPHGFYEKEMEGFFGQFGTIKRLRIARNKKTGKSRHFGFIQFESPEVAKIVAETMHNYLLHEHVLQVHLIPPEDVHPKLWRGFNYRYKPLDTVQIERKRLGKERTLEEQQKLVEKILKHDKKRQKRIEAAGIDYECPEIVGTVRPGPKKIKFED 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0057 246 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 38 245 - -
Acco04g0057 246 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 86 164 IPR000504 GO:0003723
Acco04g0057 246 Gene3D - 35 161 IPR012677 -
Acco04g0057 246 SMART rrm1_1 87 160 IPR000504 GO:0003723
Acco04g0057 246 SUPERFAMILY RNA-binding domain, RBD 71 175 IPR035979 GO:0003676
Acco04g0057 246 CDD RRM_NIFK_like 87 160 - -
Acco04g0057 246 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 88 157 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0057 Acco-ChrAcco04 558783 562779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0057 85 159 Eukaryotic Initiation Factors Gene Family AT1G71770 37.333 1.07e-08 53.5