Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0047 ATGAGTCTGCCATTTTCTCTAGCAGCAAACGCTTCCATCAATGGAAGCCATATTTGTGTGACAAAATCAATTGGTAGAATAAGAGTTAGTGTAATAAGAGCACAAGTGACCTTGACTCCAAAACCAACAGGGGATATCAGTTATCCCCAGTTGTCAAAACAAGGAATTCCTCTTGCTGATCTGCACGTACAGGAAGTTGTGGAGAGGCAGACTCAGCCGGCTAAGTTCATCACCATTCCTCGCCAGAAGCCGCAGTTTCGTCCAGGCTTTTTAGAGGAAGCATATGAAAGTTGCAGAAAGATCTGTGCAGAATATGCCAAGACCTTCTATCTAGGAACTCTGCTAATGACGGAAGAAAGACAGAAAGCTATATGGGCGATTTATGTTTGGTGCAGGAGGACAGATGAATTGGTTGATGGTCCTAATGCGGCCTATATGAGCTCTGCTGTTCTTGATAGGTGGGAGGAGAGACTGCATGACATTTTCAACGGACGCCCTTATGACCTGCTTGATGCTGCTCTGACCGACACTGTTTCTATGTTTCCCTTGGACATTAAGCCTTTCAGGGACATGATAGAAGGCATGAGGATGGATACAAGGAAAACCCGGTACAAGAATTTTGAAGAGCTACATCAATACTGCTACTACGTGGCCGGAACTGTTGGCCTGATGAGTGTTCCAGTCATGGGAATTGCGGCACAGTCTCTTCTCCCTGCTCAAACTGTATATAATGCAGCACTCTATTTGGGTCTTGGGAATCAACTGACAAACATTCTCAGAGACGTGGGAGAGGATGCATCAAGGGGTAGGGTTTACCTTCCCCAAGATGAACTAGCCCAGTTTGGCTTGAGTGACAAGGATATTTTCTCAAGAACTGTGAGTGAAGAATGGAAGGAGTTCATGAAACACCAGATAAGCAGGGCAAGATTCTACTTCAAATTGGCAGAGGAAGGAGCTTCTCAGCTTGAGAAGGCCAGCCGTTGGCCGGTTTGGTCGTCATTGATAATATACGGCAAGATCTTGGACGCAATCGAAGACAACGAATATGACAACTTGACAAGAAGGGCATACGTAGGAAGGGCTAAGAAACTTATGATGTTGCCTCTAGCTTTCACCAGATCTCTCTCATTCTCTCTCAATCTCAAGGGTCAACCCCTTCAACAACAACCTTCAATAATTGGTGTGGCCCCCCTAGGCCCCGACTCAGTTGCACAAAAATGA 1221 0.457 MSLPFSLAANASINGSHICVTKSIGRIRVSVIRAQVTLTPKPTGDISYPQLSKQGIPLADLHVQEVVERQTQPAKFITIPRQKPQFRPGFLEEAYESCRKICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNAAYMSSAVLDRWEERLHDIFNGRPYDLLDAALTDTVSMFPLDIKPFRDMIEGMRMDTRKTRYKNFEELHQYCYYVAGTVGLMSVPVMGIAAQSLLPAQTVYNAALYLGLGNQLTNILRDVGEDASRGRVYLPQDELAQFGLSDKDIFSRTVSEEWKEFMKHQISRARFYFKLAEEGASQLEKASRWPVWSSLIIYGKILDAIEDNEYDNLTRRAYVGRAKKLMMLPLAFTRSLSFSLNLKGQPLQQQPSIIGVAPLGPDSVAQK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0047 406 Pfam Squalene/phytoene synthase 105 360 IPR002060 GO:0009058
Acco04g0047 406 ProSitePatterns Squalene and phytoene synthases signature 1. 213 228 IPR019845 GO:0016765
Acco04g0047 406 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 28 375 - -
Acco04g0047 406 SFLD Phytoene synthase like 92 374 IPR044843 GO:0004311
Acco04g0047 406 CDD Trans_IPPS_HH 96 363 IPR033904 GO:0004311
Acco04g0047 406 SFLD Squalene/Phytoene Synthase Like 92 374 IPR002060 GO:0009058
Acco04g0047 406 SUPERFAMILY Terpenoid synthases 94 376 IPR008949 -
Acco04g0047 406 FunFam Phytoene synthase chloroplastic 87 369 - -
Acco04g0047 406 ProSitePatterns Squalene and phytoene synthases signature 2. 249 274 IPR019845 GO:0016765
Acco04g0047 406 Gene3D Farnesyl Diphosphate Synthase 89 369 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0047 Acco-ChrAcco04 510841 512844 Dispersed