Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0037 ATGTTTTTAATTTGTTTTGTTGCAATAGATGCCTCAGTTGACCAGTGTGTTGAGGATGGAGAGTTAGTTAATGAAGAATTTGAAGGTGAAGAGGAAGAGGCACTAAATGAAGAATCTGACTATTGTGGATCACAAAAAGGGCACAACGAACAAGACGGATTGCTGAGCATTTCAACTTTTGCATTACGAAACCATTTGCATCAAGATAGCATCATTCGCTCTTCCGCCGCGCTCCAAATCCGATCTCGTACTCCGCTGCTACTTCGTAAGATGAGAGGAAGGAGCTATAGTCCATCGCCGCCCAGGGGTTATGGCAGAAGGGGAAGAAGTCCTAGCCCCAGAGGTCGTTATGGTGGTCGTGCCAGAGATCTCCCCACCAGTCTTCTTGTTCGCAACCTTCGCCATGACTGTAGGGCCGAGGACCTTCGTAGACTTTTTGGACAATTTGGTGCTCTCAAGGACATTTACCTCCCGAAAGATTATTATACTGGAGAACCCCGAGGCTTTGGTTTTATCCAATATGTAGATCCTGCTGATGCTGCAGATGCAAAATATCATGTGGATGGTCAGGTTCTTCTTGGTCGAGAGTTGACAGTTGTTTTTGCTGAGGAGAACAGAAAGAAGCCTACTGAGATGAGAGCAAGAGAAAGAAGGGGCCGATTTTCTGATCGAAGAAGGTCTCCACCTCGTTATTCTCGCTCTCCTCGATACTCTAGGTCACCACCACGTCATAGATCTCGGTCTCGAAGTCGTGATTATAACTCTCCCCCTCCTAAACGAAGGGAGTATTCAAGATCCGTGTCACCTGAAGATAGAAGACGCAGTAGAGAAAGAGAGAGAGAAAGATCATACTCACGTTCTCCACCCTATAATGGTGGCTCAAGGAGCCGCAGTCAGAGTCCAGCTAAGGGTCCAAGCGGGAGCCGCAGTCAGAGCCCCATTCGTGATGATTATCCAAGGGAACCAGTTCGTGGCAGGTCTCCCAGTCAATGA 993 0.4763 MFLICFVAIDASVDQCVEDGELVNEEFEGEEEEALNEESDYCGSQKGHNEQDGLLSISTFALRNHLHQDSIIRSSAALQIRSRTPLLLRKMRGRSYSPSPPRGYGRRGRSPSPRGRYGGRARDLPTSLLVRNLRHDCRAEDLRRLFGQFGALKDIYLPKDYYTGEPRGFGFIQYVDPADAADAKYHVDGQVLLGRELTVVFAEENRKKPTEMRARERRGRFSDRRRSPPRYSRSPRYSRSPPRHRSRSRSRDYNSPPPKRREYSRSVSPEDRRRSRERERERSYSRSPPYNGGSRSRSQSPAKGPSGSRSQSPIRDDYPREPVRGRSPSQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0037 330 MobiDBLite consensus disorder prediction 207 230 - -
Acco04g0037 330 SMART rrm1_1 127 200 IPR000504 GO:0003723
Acco04g0037 330 MobiDBLite consensus disorder prediction 91 122 - -
Acco04g0037 330 MobiDBLite consensus disorder prediction 247 285 - -
Acco04g0037 330 MobiDBLite consensus disorder prediction 207 330 - -
Acco04g0037 330 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 128 197 IPR000504 GO:0003723
Acco04g0037 330 SUPERFAMILY RNA-binding domain, RBD 126 231 IPR035979 GO:0003676
Acco04g0037 330 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 126 204 IPR000504 GO:0003723
Acco04g0037 330 MobiDBLite consensus disorder prediction 287 313 - -
Acco04g0037 330 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 125 309 - -
Acco04g0037 330 Gene3D - 89 218 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0037 Acco-ChrAcco04 452192 456937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0037 93 189 Eukaryotic Initiation Factors Gene Family AT3G11400 35.849 1.39e-08 53.5