Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0022 ATGATTTCAGTATTTTACAGCCAATGGGATACGTATTGTATTGTTTTGAACAGTAGATACGTATTGAAGGAAAAAAGAAGCAAACACTGGTACACAAGACGGGATAAAGTCCAATCCCAAAGGGCCGAAGTACGTCGAAAGTCGTCACTTTTCAGTTTTTGGGCAAAAGCCATAACGAATGCCGTGTGGACTGTGGAGTTAGTTGTCGTGAGTCACGAGCATGTCTATCTCCCCATACCCGATTCGCTTTATGGCTTTACGCCTAAGGATATGGCCATACAGATAATGGATACCTGGCTTCCTTTTCAGAACTTTGAAGAATTCTGGGCAAGAAGGAGATGCTGGGATGAAAGCTTAGTTTTGTGGAAAATGGCAACTTTGATCGAGCCACCGAATAAAATTGGGCCGAAGGGGAAGCATTATTACTCCATATGGCAAACAGTGTTTGAGATTGATACAAAGTACGTTCCAATAAAGCCCATCGGCCGAGGAGCATATGGTGTAGTGTGCTCTTCCATCAACAGGGAAACCAATGAGAAAGTTGCAATTAAGAAGATCGGTAATATATTTGAGAATCGCATTGATGCATTGAGAACGCTGAGGGAATTGAAGCTTCTTAGACATATCAGGCACGAAAATGTGATTGCTTTGAAGGATGTTATGTTGCCTGCCCAGAGAACATGTTTCAAGGATGTGTACTTGGTTTATGAACTCATGGATACTGATCTTCATCAGATAATTAAATCTTCGCAGCCCCTCTCCATTGATCATTGCAAATATTTTATATTTCAGTTGCTTCGAGGTCTCAAATATCTTCACTCTGCAAATATCCTTCATCGGGACTTGAAGCCTGGAAATCTGCTCATCAATGCCAACTGTGATCTGAAGATATGTGACTTTGGGCTTGCACGAACAAATGGAGGCGATGGGCAGTTCATGACGGAGTATGTTGTGACTCGCTGGTACCGTGCACCGGAGCTGCTCTTATGCTGTGAAAATTATGGAACCTCAATTGATGTGTGGTCTGTGGGGTGTATTTTTGCGGAGATTCTGGGAAGAAAACCAATATTTCCTGGAACTGAATGCCTCAACCAGTTGAAACTCATTATACGTGTGCTGGGAAGCCAGGATGAGTCTGATCTAGCGTTTATTGATAATCCAAAGGCCAGGAGGTATATCAAGTCACTGCCTTACACAAGAGGCGTGCCCTTGTCTCAGCTATACCCACAAGCAGATCCATTAGCCATGGATTTATTGCAGAAAATGCTGGTGTTCGATCCAACCAAGAGAATTACCATCATGGAAGCGCTGCAACACCCGTATATGGCGGGCCTATATGATCCGAGATCTAATCCTCCTGCCCAGGTTCCAATCAATCTGGACATAGATGAAAACTGGAGGGAACCCACCATTAGAGAAATGATGTGGAACGAGATGCTTCATTATCATCCCCAAGCTTCTGCCATTGCTTAG 1473 0.4352 MISVFYSQWDTYCIVLNSRYVLKEKRSKHWYTRRDKVQSQRAEVRRKSSLFSFWAKAITNAVWTVELVVVSHEHVYLPIPDSLYGFTPKDMAIQIMDTWLPFQNFEEFWARRRCWDESLVLWKMATLIEPPNKIGPKGKHYYSIWQTVFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENRIDALRTLRELKLLRHIRHENVIALKDVMLPAQRTCFKDVYLVYELMDTDLHQIIKSSQPLSIDHCKYFIFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGGDGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIRVLGSQDESDLAFIDNPKARRYIKSLPYTRGVPLSQLYPQADPLAMDLLQKMLVFDPTKRITIMEALQHPYMAGLYDPRSNPPAQVPINLDIDENWREPTIREMMWNEMLHYHPQASAIA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0022 490 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 154 451 - -
Acco04g0022 490 SUPERFAMILY Protein kinase-like (PK-like) 147 448 IPR011009 -
Acco04g0022 490 FunFam Mitogen-activated protein kinase 141 249 - -
Acco04g0022 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Acco04g0022 490 ProSitePatterns Protein kinases ATP-binding region signature. 161 185 IPR017441 GO:0005524
Acco04g0022 490 Gene3D Phosphorylase Kinase; domain 1 142 475 - -
Acco04g0022 490 ProSiteProfiles Protein kinase domain profile. 155 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0022 490 ProSitePatterns MAP kinase signature. 190 293 IPR003527 GO:0004707|GO:0005524|GO:0006468
Acco04g0022 490 FunFam Mitogen-activated protein kinase 239 468 - -
Acco04g0022 490 CDD STKc_TEY_MAPK 149 484 - -
Acco04g0022 490 Gene3D Transferase(Phosphotransferase) domain 1 239 468 - -
Acco04g0022 490 SMART serkin_6 155 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g0022 490 Pfam Protein kinase domain 156 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0022 Acco-ChrAcco04 349400 352386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0022 124 486 MAP Kinase Gene Family AT2G18170 85.675 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Acco04g0022 Pkinase 1.5e-69 CL0016