Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0004 ATGAAGCTGGGATTTGTCCTCTTTTCTTTTATATTTTGCGGGTTGATAGCTAAATCAGTTTATTCTTCAAAACCCAGAGACCCGTACCTTGGAGTTGCTCCTGAAGATGATAAGTATTACAAGTCGTCAGCTGTAATACCATGTAAAGATGGATCCAAGGAATTCACCAAAGCTCAGCTCAATGACGATTTCTGTGACTGCCCCGATGGCACCGATGAGCCAGGTACTTCAGCATGTCCAAGTGGAAAGTTTTTTTGTCGGAATGCAGGACATGTTTCCCGTTTCCTATACTCATCTAGAGTGAATGATGGAATATGTGATTGCTGTGATGGAAGTGATGAATATGATAGCAAAGTAAAATGCCCAAATAATTGCTGGGAGGCTGGAACAGTTGCTCGTGATAAACTGAAAAGAAAGATTGTCACATACGAAGAAGGTATCTTGTTGCGAAAGCAAGAAGTTGAACAGGCACAACTAGCCCTAGCAAGAGATGAGGCAGAACTTTCTAAGTTAAGCAAAGAAGAAAGTATGCTTAAAGGGATTGTGCAACAGCTGAAGGAGCATAAAGAACAGATAGAGAAGGCAGAGGAGAAGGAAAGATTGCTGAAGGAAAAAGAAGAGGAGCAGAAAAGGGAGGCTGAGAGGAAAGCTAATGAGGAGAACCCTAAACTGGATGGAGAAGATACACAGCAAAGAAATGAAGCTGTGGTTAGTAACCATGATAGAAGTGGATCTATCAATGATTCTCCTATAAATGAGGATGTGGAAGAGGATCAGAAGTTGGCAGGTGTGCTTGATAATGATAATGGAGCCCCAAATAGTCCTGGAAATGAGGGATCTACACATATACGAGCAGAAGAGGGAAATGATTTGCCTGAAAGTACTGAGGGATTGTCAAAAGAAGAGTTGGGTAGGCTTGTTGCTTCCCGTTGGACAGGAGAAAATCCTGCCAAGCAAAGTGGTGAAGCTGATGCAACAGTTAATAAGGCTGATGAAGATAGTGAAGATCTTCCACAGGAGACAAATCTTGAGGAATATGAAAGTTATGTGTCTGAAACAGATGATGACAGCCACAAATATGATGATATTGATGTAGAAGATGAAATGGATGAAGACTTTCATGAGGAGCATGACGACCTTAGCTCCTACAAATCTGACAATGATATTTCTCCTGATTTGTCAGATGAAATTACAGCAAACAATCCTTCTTGGTTAGAGAAAATACAGAAAACTGCACGAAACATTTTTCAGGCTGTTAATTTTTTTAAGACTCCAGTGAACCAGTCAGATGCTGCTCGAGTGCGCAAGGAGTATGATGAGTCAAGTACCAAATTATCTAAATTACAGTCAAGAATATCAAGTTTGAAGCAAAAGCTAAAGCATGATTTTGGTCCTGAGAAGGAGTTCTATTCATGCTATGATCGTTGTTTTGAGAGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCCTATAAAGAGGCCTCTCAGGAGGAAGGCCATAGCACCACACGGTTGGGACGGTGGAACAAATTTGAAGACTCATACAGAGTTATGGTTTTTTCTAATGGTGATAAATGCTGGAATGGGCCTGATAGGAGTTTGAAGGTCAGGCTAAGATGTGGGCTGACAAATGGGATTACTGATGTAGATGAGCCAAGCCGTTGCGAGTACGTAGCATTCTTGTCTACCCCAGCTGTTTGCCGTGAGGAAAAGCTCAAGGAGCTACAACACAAGCTGGACTCGATGAATAAGGAACAACCTCAAAGCCATGATGAGCTGTGA 1782 0.4175 MKLGFVLFSFIFCGLIAKSVYSSKPRDPYLGVAPEDDKYYKSSAVIPCKDGSKEFTKAQLNDDFCDCPDGTDEPGTSACPSGKFFCRNAGHVSRFLYSSRVNDGICDCCDGSDEYDSKVKCPNNCWEAGTVARDKLKRKIVTYEEGILLRKQEVEQAQLALARDEAELSKLSKEESMLKGIVQQLKEHKEQIEKAEEKERLLKEKEEEQKREAERKANEENPKLDGEDTQQRNEAVVSNHDRSGSINDSPINEDVEEDQKLAGVLDNDNGAPNSPGNEGSTHIRAEEGNDLPESTEGLSKEELGRLVASRWTGENPAKQSGEADATVNKADEDSEDLPQETNLEEYESYVSETDDDSHKYDDIDVEDEMDEDFHEEHDDLSSYKSDNDISPDLSDEITANNPSWLEKIQKTARNIFQAVNFFKTPVNQSDAARVRKEYDESSTKLSKLQSRISSLKQKLKHDFGPEKEFYSCYDRCFESKQNKYTYKVCPYKEASQEEGHSTTRLGRWNKFEDSYRVMVFSNGDKCWNGPDRSLKVRLRCGLTNGITDVDEPSRCEYVAFLSTPAVCREEKLKELQHKLDSMNKEQPQSHDEL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0004 593 MobiDBLite consensus disorder prediction 200 230 - -
Acco04g0004 593 MobiDBLite consensus disorder prediction 359 375 - -
Acco04g0004 593 MobiDBLite consensus disorder prediction 283 300 - -
Acco04g0004 593 Gene3D - 469 567 IPR009011 -
Acco04g0004 593 Coils Coil 565 585 - -
Acco04g0004 593 MobiDBLite consensus disorder prediction 337 351 - -
Acco04g0004 593 Pfam Glucosidase II beta subunit-like protein 435 592 IPR036607 -
Acco04g0004 593 Pfam Glucosidase II beta subunit-like 12 163 IPR028146 -
Acco04g0004 593 ProSiteProfiles MRH domain profile. 474 569 IPR044865 -
Acco04g0004 593 MobiDBLite consensus disorder prediction 200 391 - -
Acco04g0004 593 SUPERFAMILY Mannose 6-phosphate receptor domain 474 567 IPR009011 -
Acco04g0004 593 Coils Coil 154 223 - -
Acco04g0004 593 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 6 593 IPR039794 -
Acco04g0004 593 Coils Coil 431 458 - -
Acco04g0004 593 MobiDBLite consensus disorder prediction 231 250 - -
Acco04g0004 593 CDD LDLa 79 114 IPR002172 GO:0005515
Acco04g0004 593 MobiDBLite consensus disorder prediction 376 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0004 Acco-ChrAcco04 87802 102519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g0004 22 593 Calmodulin-binding Proteins AT5G56360 52.057 0.0 587