Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g0003 ATGCGAGCTTCCTCCCTCCAGTGTCTTCATAACGAGTTACGACAATCGCAGAACCAACAACCCAGCTTACTGCTGCTGCCGCAGATGGAAGAAGTTTGTCCAAATAGTGAGCCAGTTTTTTATGAGTGTGATGAGTTTGATGTTGAGAACTCTTCTGTATCAGAGCATGATCAGGAATTTTTGGGCTCAATATCAAAGAACCATCCACCTCCAACTGTGGGCCTGGAGTTTGATTCATTTGAAGAAGCTTATAGCTTTTACAACGTTTATGCTAAAGAACAAGGTTTTGGCATTAGAGTGAGCAACTCATGGTTTAGATCAAGGAGAAAAGAGCGTTATAGAGCAAAACTCAGCTGCAGCAGTGCTGGATTCAAGAAAAAGAGTGATGCCCATAATCCAAGACCAGAAACAAGAACTGGCTGCCCAGCAATGATAGTCATTAGGATGGTGGATTCCAAAATATGGAGGATAGTGGAAGTTGAACTGCAACACAATCATCAGGTGAATCCAGGAATTAAACGGTTCTATAAGTCACATAAGAAAATGATACTTGCAGCCAGAGAGGCACAACCACCACCAGATCCTATTACTGAAATACATGCTATTAAATTGTATCGAACAGCTGTCATGGATGCTGGTTATAATGGATTCTCCTATTTGGTTGATGGACAGGAGACCAACTTTGGAAATTTGAGATATTTGGAACTTAAAGAAGGGGATGGCCATACTATTTATAATTATTTTTGTCGAATGAAATTGACAAACCCAAATTTCTTTTACTTATTTGACATTGATGATGATGGGCGCCTAAGAAATGTGTTTTGGGCTGATGCCAGGTCGAGGGTGTCTTACAGTTATTTTAATGACACTGTTATTATAGATACAACTTGTTTGACAAACAAATATGAGATCCCTCTGATATCATTTGGTGGTGTAAACAACCACGGACAGTTGGTGCTACTGGGCTGTGGCTTTCTTGGGTATGAAAATGTTGATAATTTTGTTTGGATTTTTAATGCATGGCTAAAATGTATGCTTGGTTGTCCGCCACATGTTGTTATTACTGACCAGTGCAAGCCCTTGCAAACTGCAGTGGCTCAGGTTTTTCCTCATGCTCGTCATTGTTATTCTTTGCAATATATCATGCACAGAGTTCCAGAAAAGTTGGGAGGGTTGAAGGGATATGAAACAATCAGAAAGCAATTGAACAGAGCAGTTTATGAGTCCTTCAAGATAGTCGAGTTTGAAAATTATTGGGCTGATATGATCAAGCAGCATGGATTGGGGGATAACAAATGGCTTCAAACATTGTATAAGGATAGGCATCTGTGGGTTCCAGTTTACCTCAAAGACACTTTTTTCGCAGGAACGGTCCCTACAAAAGAGAACGAGGGCCTGATTGCATATTTTGATGGATATGTGCACAAGCACACCTCCTTCAAGGAATTCATTGACAAGTATGATCTAGCTCTGCATAGGAAGAACTTGAAAGAAGCCATGGCAGAGTTGGAGTCAAGGAAATCAAGTGTTGTATTGAATACAAGGTGTAATTTTGAACTGCAGTTATCAAAGTTGTACACAAAAGAAATCTTTAAAAAATTCCAGTCTGAGGTTGACGGTATGTACTCCTGCTTCAATACAAGACAGGTAAATGTTAATGGATCTATAATAACATATATAGTGAAAGAACGAGTTGAAAATGAGGGAAATGAGAAGGACATCAAAAAATTTGAAGTCTTGTATGAGGCAAATGAACTGGACATACGATGTATTTGCGGTTTGTTCAATTTCAAAGGTTATCTTTGTAGGCATGCTCTGAATGTTCTCAATTATAATGGTGTGGAGGAAGTCCCATCTCGGTTCATTCTGCAACGTTGGAAGAAAGATTTCAAACAAAGGTCTATTCAAGACCATGTCTCTGGTAACGCTGATACATACAACCCTGTTGCCTGGCAAAAACAACTTTTTCATAATGCTCTTCCAGTGCTAGAAGAAGGGGCACAGTCGCAAGAGCATTACATGATTGCTTTACTAGAACTGGAACAGTTGTTAAACAAGTTTGATCTATTGTAA 2073 0.3941 MRASSLQCLHNELRQSQNQQPSLLLLPQMEEVCPNSEPVFYECDEFDVENSSVSEHDQEFLGSISKNHPPPTVGLEFDSFEEAYSFYNVYAKEQGFGIRVSNSWFRSRRKERYRAKLSCSSAGFKKKSDAHNPRPETRTGCPAMIVIRMVDSKIWRIVEVELQHNHQVNPGIKRFYKSHKKMILAAREAQPPPDPITEIHAIKLYRTAVMDAGYNGFSYLVDGQETNFGNLRYLELKEGDGHTIYNYFCRMKLTNPNFFYLFDIDDDGRLRNVFWADARSRVSYSYFNDTVIIDTTCLTNKYEIPLISFGGVNNHGQLVLLGCGFLGYENVDNFVWIFNAWLKCMLGCPPHVVITDQCKPLQTAVAQVFPHARHCYSLQYIMHRVPEKLGGLKGYETIRKQLNRAVYESFKIVEFENYWADMIKQHGLGDNKWLQTLYKDRHLWVPVYLKDTFFAGTVPTKENEGLIAYFDGYVHKHTSFKEFIDKYDLALHRKNLKEAMAELESRKSSVVLNTRCNFELQLSKLYTKEIFKKFQSEVDGMYSCFNTRQVNVNGSIITYIVKERVENEGNEKDIKKFEVLYEANELDIRCICGLFNFKGYLCRHALNVLNYNGVEEVPSRFILQRWKKDFKQRSIQDHVSGNADTYNPVAWQKQLFHNALPVLEEGAQSQEHYMIALLELEQLLNKFDLL 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g0003 690 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
Acco04g0003 690 SMART 26again6 588 615 IPR006564 GO:0008270
Acco04g0003 690 Pfam FAR1 DNA-binding domain 85 170 IPR004330 -
Acco04g0003 690 Coils Coil 493 513 - -
Acco04g0003 690 Pfam MULE transposase domain 291 383 IPR018289 -
Acco04g0003 690 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 686 IPR031052 GO:0006355
Acco04g0003 690 Pfam SWIM zinc finger 578 610 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g0003 Acco-ChrAcco04 65006 69101 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco04g0003 MULE 3.5e-21 CL0219