Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2460 ATGGGTATTTGCTGGGGCTCTCCAGCTAGCAACCCAAGCACCACCAGCACATCGGATCACCTTAGTGCAGCTACAACGGGAACATCCCGAACTACCAGCAATACTACTACTGCTACTACATCTTATGGGAGTGGAAGCATCAGCCTGTTTTCCGAGTCCAGTGGAGGTGACGCTTATCCAAATGGGCAGATTTTGCCTACTTCAAATTTAAGGATATTCACTTTTGCGGAATTGAAGGCTGCGACTAGAAATTTTAGAGTTGATACAGTACTTGGAGAGGGAGGTTTTGGAAAGGTCTTCAAGGGTTGGCTCGAAGAAAAGGCAACGCCAAAAAATGGAAGTGGAACAGTCGTTGCCGTTAAAAAATTGAACTCAGAGAGTTTACAAGGATTTGAGGAATGGCAGTCAGAGATAAATTTTCTGGGACGGCTTTCTCATCCTAACCTTGTTAAGCTGTTAGGGTACTGTTGGGAAGAAAATGAGCTTCTTCTCGTCTATGAATTCATGCAAAAGGGAAGTTTGGAAAATCACCTATTTGGAAGGGGTTCTGCTGTTCAACCACTTCCATGGGACATTAGGCTTAAGATTACAATTGGAGCAGCTCGTGGTTTGTCATTCCTGCACACATCTGAGAAAGTAATTTACCGTGATTTCAAGGCGTCCAATATTTTGCTCGATGGGTCTTATAATGCAAAGATTTCAGACTTTGGCTTGGCAAAATTGGCACCTTCAGCTAGTCGGTCCCATGTAACAACAAGGGTGATGGGCACGTTTGGCTATGCGGCTCCTGAGTATGTGGCAACAGGTCATCTGTACGTGAAGAGTGATGTGTACGGATTTGGAGTTGTTTTGGTTGAGATGCTGACAGCCCTTCGGGCACTAGATCAAAACCGCCCCAGCGGCCAACAAAATCTTGTGGACTGGGTAAAACCACACCTACAAGATGGAAGAAAATTGAAGATCATAATGGATTCACGGTTGGAGGGAAAATATCCTTCCAAATCTGCATTTCGTATAGCTCAACTTGCTTTAAAATGTCTTGCGTTAGAGCCTAAACACCGGCCATCAATGAAGGAAGTTTTGGAGAACTTGGAGAGGATTCAAGCTGCGAATGATAGGCCTGTGGAGCCTAGACTCCGTTCTAATCGTAACGTGGCCCGACCTCTGCGCCCTCGATCTCATTGA 1185 0.4532 MGICWGSPASNPSTTSTSDHLSAATTGTSRTTSNTTTATTSYGSGSISLFSESSGGDAYPNGQILPTSNLRIFTFAELKAATRNFRVDTVLGEGGFGKVFKGWLEEKATPKNGSGTVVAVKKLNSESLQGFEEWQSEINFLGRLSHPNLVKLLGYCWEENELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKITIGAARGLSFLHTSEKVIYRDFKASNILLDGSYNAKISDFGLAKLAPSASRSHVTTRVMGTFGYAAPEYVATGHLYVKSDVYGFGVVLVEMLTALRALDQNRPSGQQNLVDWVKPHLQDGRKLKIIMDSRLEGKYPSKSAFRIAQLALKCLALEPKHRPSMKEVLENLERIQAANDRPVEPRLRSNRNVARPLRPRSH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2460 394 MobiDBLite consensus disorder prediction 372 394 - -
Acco03g2460 394 ProSitePatterns Protein kinases ATP-binding region signature. 91 122 IPR017441 GO:0005524
Acco03g2460 394 MobiDBLite consensus disorder prediction 1 38 - -
Acco03g2460 394 Pfam Protein tyrosine and serine/threonine kinase 87 364 IPR001245 GO:0004672|GO:0006468
Acco03g2460 394 ProSiteProfiles Protein kinase domain profile. 85 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2460 394 Gene3D Transferase(Phosphotransferase) domain 1 169 384 - -
Acco03g2460 394 FunFam Serine/threonine-protein kinase BIK1 52 168 - -
Acco03g2460 394 CDD STKc_IRAK 91 367 - -
Acco03g2460 394 MobiDBLite consensus disorder prediction 7 38 - -
Acco03g2460 394 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 169 376 - -
Acco03g2460 394 SUPERFAMILY Protein kinase-like (PK-like) 64 366 IPR011009 -
Acco03g2460 394 PANTHER OS01G0588500 PROTEIN-RELATED 30 368 - -
Acco03g2460 394 Gene3D Phosphorylase Kinase; domain 1 69 168 - -
Acco03g2460 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2460 Acco-ChrAcco03 50094942 50099227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2460 57 393 Receptor kinase-like Gene Family AT4G02010 49.855 1.64e-101 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco03g2460 PK_Tyr_Ser-Thr 4.3e-48 CL0016