Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2447 ATGGGTTGCTGCCCATCATCATTTCGGACCGAAACTCACCCAGAAAAGCAGCAAAATCAACAACCCCCTCACCATGTTCACACTCACAACCACATCCATTCCCAACCACACCCACCACCCTCTCTCACCCCCGACCCATCTGCCGCCGGTGGGGTTTTTTCTTTCTCCGAGTTCTCTTTCTCCGACCTCAAAGCAGCCACCAATAATTTTAGCTCCGACTTTATTGTGTCCGAGAGTGGAGAGAAGGCACCCAACCTTGTGTATAAAGGTCGCCTCCCCAACCGCCGTTGGATTGCCGTCAAGAAGTTCACCAAGGCTGCATGGCCTGATCCCAAGCAATTTGTGGATGAGGCGTCAGGTGTAGGAAAATTGCGACATCGCAGGCTTGCTAATCTGATTGGCTACTGCTGTGATGGAGATGAGAGGCTGCTTGTTGCAGAATATATGCCCAATGACACTCTCGCTAAGCATCTTTTCCACTGGGAAAACCAGACTATTGAGTGGGCCATGCGCTTAAGAGTGGCTTTTTCCATTGCAGAAACTTTAAATTACTGTAGTACCGAGGGTCGCCCATTATACCATGATTTGAATGCTTACAGGGTTCTTTTTGACGAGGAAGGTGATCCACGTCTGTCGTGTTTTGGTCTGATGAAGAATAGTAGGGATGGAAAAAGTTATAGCACGAATCTTGCTTACACGCCTCCGGAGTACTTAAGAAATGGAAGGGTCACTCCTGAAAGTGTCATTTACAGCTTTGGTACTGTTCTCCTAGACCTACTAAGTGGAAAACACATCCCTCCAAGTCATGCACTTGACATGATACAGGGGAAAGCCAACATGCTTCTTATGGATTCACATTTAGAGGGAAAGTTCTCTAAAGAAGAGGCAGCAGTAGTTGTCAATCTGGCCTCTAAATGTTTGCAATATGAACCCCGGGAGCGGCCTGATACAAAGGAATTAGTCACAACACTTGCTCCATTGCAAACAAAACCTGAAGTACCGTCTTACGTTATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAACCCCACAACGCCCTCTTTCAGCCATGGGTGAGGCTTGTTCAAGGATGGACCTCACTGCCATACATCAGATCTTGGTTGCAACGCACTACAGAGATGATGAAGGAACTAATGAGTTGTCTTTCCAAGAGTGGACCCAACAGATGAGGGATATGTTGGAAGCAAGGAAACGTGGAGACTATGCATTCCGTGACAAGGATTTTAAGACAGCAATTGAAAATTATTCACAGTTTATCGATGTGGGAACTATGGTGTCACCAACGGTTTTTGCTCGGCGCAGTCTATGCTATCTGTTATGCGACCAACCAGACCCTGCGCTGAGAGATGCAATGCAAGCACAGTGTGTTTATCCAGACTGGCCTACAGCATTCTACATGCAATCAGTTGCTCTAGCGAAGCTGGACATGCAAAAGGACGCTGCTGATATGTTGAATGAGGCTACTGCTTTGGAAGAAAAGAGGCAAAGAGGAGGCAGAGGCGCATAG 1530 0.4719 MGCCPSSFRTETHPEKQQNQQPPHHVHTHNHIHSQPHPPPSLTPDPSAAGGVFSFSEFSFSDLKAATNNFSSDFIVSESGEKAPNLVYKGRLPNRRWIAVKKFTKAAWPDPKQFVDEASGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVAFSIAETLNYCSTEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKANMLLMDSHLEGKFSKEEAAVVVNLASKCLQYEPRERPDTKELVTTLAPLQTKPEVPSYVMLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIENYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDAADMLNEATALEEKRQRGGRGA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2447 509 SUPERFAMILY Protein kinase-like (PK-like) 53 334 IPR011009 -
Acco03g2447 509 FunFam probable serine/threonine-protein kinase At5g41260 150 341 - -
Acco03g2447 509 FunFam probable serine/threonine-protein kinase At4g35230 398 507 - -
Acco03g2447 509 Gene3D Phosphorylase Kinase; domain 1 49 148 - -
Acco03g2447 509 ProSiteProfiles Protein kinase domain profile. 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2447 509 MobiDBLite consensus disorder prediction 10 25 - -
Acco03g2447 509 MobiDBLite consensus disorder prediction 1 47 - -
Acco03g2447 509 SUPERFAMILY TPR-like 401 502 IPR011990 GO:0005515
Acco03g2447 509 Gene3D Transferase(Phosphotransferase) domain 1 150 341 - -
Acco03g2447 509 FunFam probable serine/threonine-protein kinase At4g35230 46 148 - -
Acco03g2447 509 Gene3D Tetratricopeptide repeat domain 398 506 IPR011990 GO:0005515
Acco03g2447 509 Coils Coil 481 501 - -
Acco03g2447 509 Pfam Protein tyrosine and serine/threonine kinase 88 324 IPR001245 GO:0004672|GO:0006468
Acco03g2447 509 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 504 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2447 Acco-ChrAcco03 49924016 49930227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2447 58 336 Glycoside Hydrolase AT3G07070 35.621 1.40e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Acco03g2447 PK_Tyr_Ser-Thr 1.1e-25 CL0016