Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2441 ATGAGTATGACATCAGGAGAAGGAGAAATGGAACTGCCGGGCTTCCGATTCCACCCCACCGAAGAAGAACTCCTCGATTTCTACCTCAAGAACAGCATCCTCGGAAACAAGCTCCGCTTCGACATCATCGGTTTCCTCAACATCTATCACCACGATCCCTGGGACTTGCCTGGCCTTGCCAAGGTGGGAGAGAGAGAGTGGTACTTCTTCGTGCCGAGGGACAAGAAGCAGGGGAGCGGCGGGAGGCCCAACCGCACCACCCAGAAAGGGTTCTGGAAGGCCACCGGTTCAGACAGAAGAATCATAAGCCTGTCGGAGCCAAAGCGCCTCATCGGCCTGAGGAAGACCCTGGTGTTCTACCGAGGGCGAGCCCCCCGCGGGTGCAAGACCGACTGGGTCATGAACGAGTACCGGCTCCCCGACTCGTGTCACCTCCCCAAGGACGTTGTGCTCTGCAAGATTTACAGAAAGGCCACCTCGTTGAAGGTCCTGGAGCAGAGGGCTGCCCTTGAAGAAGAGTCCAAGCAGTTCCCTCTCGCTAACGTGTCCCCCTGCAGCTCCAGCGACACCCCCTCCCTCCTTCTCAAGCAAGAATCCCCCGACCACGACCACGACCACTACCACTTGTTTGATCTTCATGACCACAAAGCCTCTTCCCTCCCAACCAAAGACAAATTTGGCGACCTCCATCTTCCCATTATTTCCATGGACTCCGGCCAAGACCCCTTCTGGACTCAATTTAACAACACTCCTTGCCCCTCCCTCTTCAACTTCTAA 777 0.5611 MSMTSGEGEMELPGFRFHPTEEELLDFYLKNSILGNKLRFDIIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKQGSGGRPNRTTQKGFWKATGSDRRIISLSEPKRLIGLRKTLVFYRGRAPRGCKTDWVMNEYRLPDSCHLPKDVVLCKIYRKATSLKVLEQRAALEEESKQFPLANVSPCSSSDTPSLLLKQESPDHDHDHYHLFDLHDHKASSLPTKDKFGDLHLPIISMDSGQDPFWTQFNNTPCPSLFNF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2441 258 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 201 - -
Acco03g2441 258 FunFam NAC domain-containing protein 67-like 20 161 - -
Acco03g2441 258 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Acco03g2441 258 Gene3D NAC domain 20 161 IPR036093 GO:0003677|GO:0006355
Acco03g2441 258 SUPERFAMILY NAC domain 9 157 IPR036093 GO:0003677|GO:0006355
Acco03g2441 258 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2441 Acco-ChrAcco03 49894560 49895425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2441 9 199 NAC Transcription Factor Family AT2G17040 72.775 4.18e-103 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco03g2441 NAM 5e-34 No_clan