Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2432 ATGGACTCCCTCAGAAAATCCTTCAAATCCTATTATTCTTACAAACACCCCAGAAAGATCTCTGCTGGCACAGACGCCGACTCCGGTCACGAACAGCTTCCCATTCTACTTGATCAAGAAACTCCCCACGATCACCCTCCTCCTCACCTCACTTCTCCCTCATCAATGACCTCCACTACTTCGCCGCATCGCCCCGAGGTTGTCGTTAAAATCGACGAAGGTGACTCCAGAGGTCCCGCAGTGCAACAGGGTGACAAGATTTGGAGAGAAACTAGCTATGACTTCTGGAACAATGGAGACGTGAGCAAGACTGTCAGTGACGGGAGTGCTGGCGCTACTACTAGCGGTAACGGCGAGGATAGCTTTGATTTCCGGCAACATGGGCCGGGTTCCAAGGATCCACCTTCCATGCTCATTGGCAAGTTCTTGCACAAACAGAAAGCGTCTGGTGACCTGTCGCTGGATATGGATTTAGAAATGGAGGAGTTCCAGCATGACTACAAATTGCCTTCGGTGGAAGAGTCTCCGCAGCTCAATAGCATTTCCAAGGACCTCAAAGTCTCGTTCGAGGAACCAACTTCCAGTGTTGTTGAACCGGCAAGTGATACCGTTAGACGAAGGTACAGGGAGTCGCCGTGTAACACCGAAGTTCATAAATCGCCGCAAAGCGATCAGCGTGGATCGCCGGCTGTTACTCAAAGTGGTAATGCCGGTGCGGGAGATGGCGAGGTGGTAAGATGTACCTCCAACGCCTCGGTTGAAAGGAATCTTTCGTTGCAGAGGAAATCAGCCTTACTGAAGGCCAGAAATAAGTCGAGATTGTTGGACCCGCCGGAGGAGCCGGACCGAAAGTCTGGTCGGGTGGCAAAATCAGGGCAAATGCTTTCGGGGATGTTAGGGAGAAAAGTGGATGAGGAGGACGACGATCCATTTTTTGGGGAAGACGTGCCGGATGAGTTGAAAAAGACCCATTTTAGCATATGGATTCTGCTGGAGTGGTTGAGTTTGATTTTGTTTGTTGCTGCGCTTGCATGCACGCTGAGTATCCCGATTTTGAGGAATAAGATTCTATGGAAGCTCCAGTTATGGAAATGGGAGGTGATGATCCTGGTTCTAATATGTGGTCGGTTGGTTTCTGATTGGGTAATTCGAATTTTGGTGTTCTTTATCGAAAGAAATTTCCTTTTGCGGAAGAGAGTCCTCTATTTTGTGTACGGTGTGAAGAAGGCAGTTCAGAATTGTCTATGGTTGGGATTTGTTTTGATTGCTTGGCATCTCTTGTTCGATAAGAAGGTTGAGAAGGAGACTAGAGGCAACGCCCTTCAATATGTCTCCAAGGTCTTGGTCTGTTTCTTGGTGGGTACTTTGGTGTGGTTGGCAAAAACTCTTGTGGTCAAGGTTATGGCTTCTTCCTTCTATACAAGCACCTACTTTGATAGGATTCAGGAGTCACTGTTTAATCAGTTTGTGATTGAAACACTGTCTGGGCCACCTCTGATAGAAATTCAGAAGTCAGAGGAAGAGGAGCAAAAACTTGCTGATGAGGTTCAGAAACTGCAGAATGCTGGGGTTGACATCCCCCCTGAGCTTAGGGCAGCTGCCTTCTCCACAACCAAGAGTCCAAGGGCAGCTGCCTTCTCCAAAACTAAGAGTCCAAGGACGGCGAAAAGTGGAATGCTCCAGAAAAGCCCTCGTCTTATAAGTGGAAAGTTTTCTCGTCCTCTTTCCCATAAATCGGACGATGGGATTACTATTGATCACCTGCATAAGCTGAATCCAAAAAATGTCTCTGCCTGGAATATGAAAAGGTTAATGAATATGGTCCGGCATGGCACTCTTTCTACACTGGATGAGCAGATACTTGATTCAACTGAAGATGATGAAAATGCCACACAGATTAGAAGTGAAAAAGAGGCAAAAGCCGCGGCAAAGAAAATATTTCAGAATGTTGCCAGGCAGGGTTTCAGGTTCATTTACCTGGAGGATTTGCTGCGATTTATGCGGGAAGATGAAGCTGAGAAAACCATGGATCTCTTTGAAGGAGCTTCTGAGTCTGGGAAGATCAGCAAATCTGCCCTGAAGAATTGGGTGGTTAATGCCTTCAGAGAGAGGAGAGCGCTTGCTTTGACATTGACTGATACCAAAACCACTGTGAATCAACTTCATCGAATACTCAATTTTATGGTTGGGATCATTATACTGGTTATTTGGCTACTAATACTGGGAATTGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAGCTTGTTTTGGTTGCGTTTATATTTGGAAATACCTGCAAGACGATATTTGAAGCAATTGTTTTCTTATTTATCATGCACCCATTTGATGTGGGGGATAGGTGTGAAATCGATCAGATTCAGATGGTTGTGGAAGAAATGAATATACTGACAACCACATTTTTAAGATATGACAATCTAAAAATAATCATCCCCAACAGCGTCCTTGCCACTAAGGCCATAAATAATTACTACCGGAGTCCAGACATGGGAGATGCTATTGATTTCTTTATACACGTGTCTACCCCAGCTGAAAAGATTGCTCTCATGAAACAAAGAATACACAGCTTCATCGATAACAAGAAGGAGCACTGGTATCCTTCATCTTTTTTAGTCTTCAGGGATCTGGAGCAATTAAACATGATTAGGATATCGATTTGGCCAACTCATACAATGAACCACCAAGACATGGGAGAAAGGTTTATCAGAAGATCCCTTCTGATCGAAGAGCTGCTCAGGATATTCCGGGAGATTGACATCCAGTACCGTCTTCTTCCTCTTGATATTAACGTCAGAGGCATGCCTACCACTTCTGAACGGCTTCCACCTAGTTGGGCCAATATCACAAGTTGA 2874 0.4548 MDSLRKSFKSYYSYKHPRKISAGTDADSGHEQLPILLDQETPHDHPPPHLTSPSSMTSTTSPHRPEVVVKIDEGDSRGPAVQQGDKIWRETSYDFWNNGDVSKTVSDGSAGATTSGNGEDSFDFRQHGPGSKDPPSMLIGKFLHKQKASGDLSLDMDLEMEEFQHDYKLPSVEESPQLNSISKDLKVSFEEPTSSVVEPASDTVRRRYRESPCNTEVHKSPQSDQRGSPAVTQSGNAGAGDGEVVRCTSNASVERNLSLQRKSALLKARNKSRLLDPPEEPDRKSGRVAKSGQMLSGMLGRKVDEEDDDPFFGEDVPDELKKTHFSIWILLEWLSLILFVAALACTLSIPILRNKILWKLQLWKWEVMILVLICGRLVSDWVIRILVFFIERNFLLRKRVLYFVYGVKKAVQNCLWLGFVLIAWHLLFDKKVEKETRGNALQYVSKVLVCFLVGTLVWLAKTLVVKVMASSFYTSTYFDRIQESLFNQFVIETLSGPPLIEIQKSEEEEQKLADEVQKLQNAGVDIPPELRAAAFSTTKSPRAAAFSKTKSPRTAKSGMLQKSPRLISGKFSRPLSHKSDDGITIDHLHKLNPKNVSAWNMKRLMNMVRHGTLSTLDEQILDSTEDDENATQIRSEKEAKAAAKKIFQNVARQGFRFIYLEDLLRFMREDEAEKTMDLFEGASESGKISKSALKNWVVNAFRERRALALTLTDTKTTVNQLHRILNFMVGIIILVIWLLILGIATTKFLLFVSSQLVLVAFIFGNTCKTIFEAIVFLFIMHPFDVGDRCEIDQIQMVVEEMNILTTTFLRYDNLKIIIPNSVLATKAINNYYRSPDMGDAIDFFIHVSTPAEKIALMKQRIHSFIDNKKEHWYPSSFLVFRDLEQLNMIRISIWPTHTMNHQDMGERFIRRSLLIEELLRIFREIDIQYRLLPLDINVRGMPTTSERLPPSWANITS 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2432 957 MobiDBLite consensus disorder prediction 541 558 - -
Acco03g2432 957 MobiDBLite consensus disorder prediction 272 287 - -
Acco03g2432 957 Gene3D - 782 831 IPR023408 -
Acco03g2432 957 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 47 952 IPR016688 -
Acco03g2432 957 Coils Coil 502 522 - -
Acco03g2432 957 MobiDBLite consensus disorder prediction 50 64 - -
Acco03g2432 957 FunFam Predicted mechanosensitive ion channel 782 831 - -
Acco03g2432 957 MobiDBLite consensus disorder prediction 215 235 - -
Acco03g2432 957 MobiDBLite consensus disorder prediction 104 138 - -
Acco03g2432 957 MobiDBLite consensus disorder prediction 189 243 - -
Acco03g2432 957 MobiDBLite consensus disorder prediction 104 121 - -
Acco03g2432 957 MobiDBLite consensus disorder prediction 270 290 - -
Acco03g2432 957 Pfam Mechanosensitive ion channel 723 927 IPR006685 GO:0016020|GO:0055085
Acco03g2432 957 PIRSF Memb_At2g17000 41 957 IPR016688 -
Acco03g2432 957 MobiDBLite consensus disorder prediction 541 562 - -
Acco03g2432 957 MobiDBLite consensus disorder prediction 19 64 - -
Acco03g2432 957 SUPERFAMILY Sm-like ribonucleoproteins 772 831 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2432 Acco-ChrAcco03 49825221 49829645 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2432 64 953 Mechanosensitive Ion Channel Family AT1G78610 56.441 0.0 941