Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2430 ATGAAAAGGTTAATGAATATGGTCCGGCATGGCACTCTTTCTACACTGGATGAGCAGATACTTGATTCAACTGAAGATGATCAAAATGCCACACAGATTAGAAGTGAAAAAGAGGCAAAAGCCGTGGCAAAGAAAATATTTCAGAATGTTGACAGGCGGGGTTGCAGCTTCATTTACCCAGAGGATTTGATGCGATTTATGCGGGAAGATGAAGCTGAGAAAACCATGGATCTCTTCGAAGGAGCTTCTGAGTCTGGGAAGATCAGCAAATCTGCCCTGAAGAACTGGGCGGTTTTATCCATAAGAAGAAGCTATTTGGAGACTCCGCGAAAGGACAAAAAGCGAAGTCACAAAAAGGAACCAAAACTTGTTTTGGTTGCGTTTATATTTGGAAATACCTGCAAGACGATATTTGAAGCAATTGTTTTCTTATTTATCATGCACCCATTTGATGTGGGGGATAGGTGTGAAATCGATGGGATTCAGATGGTTGTGGAAGAAATGAATATACGGACAACCAGAATTTTAAGATATGACAACCTAAAAATAATCATCCCCAACAGCGTCCTTGCCACTAAGGCCATATATAATTACTACCAGAGTCCTGACATGGGAGATGGTATTGATTTCTCTATACACGTGTCTACCCCAGCTGAAAAGATTGAACTCATGAAACAAAGAATTCACAGCTTCATCAATAACAAGGAGGAGCACTGGTATCCTTCACCTTTTATAGTCTTCAGGGAGCTGATTAGGATATCGATTTGGCCAACTCATAGAATGAACCACCAAGACATGGGAGAAAGGTTTGTCAGAAGATCCCTAGTGATCGAAGAGCTGCTCCGGATATTCCGGGAGATCGACATCCAGTACCGTCTTCTTCCTCTTGATATTAACATCAGAGGCATGCCTGCCACTTCTGAACGGCTTCCACCTAGTTGGGCCAATATCACAATTTATGGAGCTGACAATAATATGGATCCTGTGCAATATTTCTTGCCATCTCATGCCTTCCTTGTCTCCTTCCTTGGCCATGATTAG 1041 0.4217 MKRLMNMVRHGTLSTLDEQILDSTEDDQNATQIRSEKEAKAVAKKIFQNVDRRGCSFIYPEDLMRFMREDEAEKTMDLFEGASESGKISKSALKNWAVLSIRRSYLETPRKDKKRSHKKEPKLVLVAFIFGNTCKTIFEAIVFLFIMHPFDVGDRCEIDGIQMVVEEMNIRTTRILRYDNLKIIIPNSVLATKAIYNYYQSPDMGDGIDFSIHVSTPAEKIELMKQRIHSFINNKEEHWYPSPFIVFRELIRISIWPTHRMNHQDMGERFVRRSLVIEELLRIFREIDIQYRLLPLDINIRGMPATSERLPPSWANITIYGADNNMDPVQYFLPSHAFLVSFLGHD 346
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2430 346 Gene3D - 149 198 IPR023408 -
Acco03g2430 346 Pfam Mechanosensitive ion channel 124 288 IPR006685 GO:0016020|GO:0055085
Acco03g2430 346 SUPERFAMILY Sm-like ribonucleoproteins 139 198 IPR010920 -
Acco03g2430 346 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 123 314 IPR016688 -
Acco03g2430 346 FunFam Predicted mechanosensitive ion channel 149 198 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco03g2430 Acco-ChrAcco03 49816313 49819585 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2430 1 315 Mechanosensitive Ion Channel Family AT1G78610 54.469 4.72e-133 398