Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2387 ATGGGAAGGTCTCCTTGCTGCGAGAAAGCTCACACGAACAAAGGAGCATGGACCAAGGAAGAAGACGATCGCCTCGTCGCTTATATTCGAGCTCATGGCGAGGGCTGCTGGCGCTCTCTCCCCAAGGCCGCCGGACTCCTCCGTTGTGGCAAGAGCTGCCGCCTCCGCTGGATCAACTACCTCCGCCCCGACCTCAAACGCGGCAACTTTACTGAAGAAGAAGATGAGCTCATCATCAAGCTCCATAGCCTCCTTGGCAACAAGTGGTCGCTGATAGCAGGGAGGTTACCTGGAAGAACGGACAACGAGATAAAGAATTACTGGAATACTCATATAAGAAGGAAGCTTCTGAGCAGAGGAATCGACCCTACAACTCACAGGCCTCTCAACGACCCTTCTTCTCAGAACCAATCTATTGCTTCATCTGCTTCTGCCGCTCAACATCAAGAGGAGATTCTGAATACGGATGCGAGTTCCAAACGACCCGGCGGCGTCTTACAAGTATGCCCCGACTTGAATCTTGAGCTAACCATCAGCCTTCCCCATCATCATCAGAAGCAACCAGATCATGGTGGGAGCAGTACGACCGGCAATGGTTATGATTTCTTGGGATTGAAAAGCAGCGTTTTGGATTGCAGGAGCAGCGTAACCCAATTAGATTGGACAATACTCAGAGAATGA 681 0.5125 MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPTTHRPLNDPSSQNQSIASSASAAQHQEEILNTDASSKRPGGVLQVCPDLNLELTISLPHHHQKQPDHGGSSTTGNGYDFLGLKSSVLDCRSSVTQLDWTILRE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2387 226 CDD SANT 69 112 IPR001005 -
Acco03g2387 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco03g2387 226 SMART sant 66 114 IPR001005 -
Acco03g2387 226 SMART sant 13 63 IPR001005 -
Acco03g2387 226 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Acco03g2387 226 Gene3D - 69 153 - -
Acco03g2387 226 CDD SANT 16 61 IPR001005 -
Acco03g2387 226 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco03g2387 226 MobiDBLite consensus disorder prediction 120 160 - -
Acco03g2387 226 FunFam MYB-related transcription factor 13 66 - -
Acco03g2387 226 FunFam MYB transcription factor MYB48 69 168 - -
Acco03g2387 226 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 150 - -
Acco03g2387 226 Gene3D - 14 66 - -
Acco03g2387 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco03g2387 226 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Acco03g2387 226 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco03g2387 226 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco03g2387 226 MobiDBLite consensus disorder prediction 127 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2387 Acco-ChrAcco03 49471299 49472344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2387 1 220 MYB Transcription Factor Family AT4G38620 61.789 2.19e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco03g2387 Myb_DNA-binding 4e-14 CL0123