Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2381 ATGGTTGGTTCTTCTAAAGAAGAGAGCGACGAAGCAATGCGGAAAGAGATGTCCTTTCTTGCTCAACCGCGCTGCCTCCTTCTATTCCTTGTTCTTTCAGTTTTTCTGATTTTCGCCTTCTCTTTCTCTAAGCGGGTTGAGGAGAAACCAGAAGAGGAGCCTGAAATTACACACAGAGTATTTTTGGATATTGATATTGATAACCAACGGTTAGGTAGGATCATTATTGGATTATATGGCCAAGTTGTACCAAAAACAGTGGAGAATTTCAGAGTTTTATGCACAGGGGAGAAAGGCAAGAGTTCCAATGGCTTGAAACTTCATTATAAAGGAACACCATTTCATCGCATAATATCTGGTTTTGTGATTCAAGGTGGAGACATTGTTCATCATGATGGCAGAGGTTATAAGTCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGACAAAACATTCACATGCTGGGGTTGTATCCATGGTGAATTCTGGACCTGATTCCAATGGCTCACAGTTTTTTATCACCACTGTGAAGGCTAGCTGGTTGGATGGAGAACACGTTGTATTTGGGAAGGTAGTAGAAGGTATGGATAATGTGTTTGCTATAGAAGGAGGAGCCGGAACCTACAGTGGCAAACCCAGAAAGAAAGTAGTAATATCTGACTCTGGAGAGATACCCCGGAGCCAGTGGGACGAGCAAGGACGAATCTCCGTGTCACAGTGA 726 0.427 MVGSSKEESDEAMRKEMSFLAQPRCLLLFLVLSVFLIFAFSFSKRVEEKPEEEPEITHRVFLDIDIDNQRLGRIIIGLYGQVVPKTVENFRVLCTGEKGKSSNGLKLHYKGTPFHRIISGFVIQGGDIVHHDGRGYKSIYGGTFPDENFKTKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVVEGMDNVFAIEGGAGTYSGKPRKKVVISDSGEIPRSQWDEQGRISVSQ 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2381 241 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 64 222 IPR002130 GO:0000413|GO:0003755
Acco03g2381 241 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 59 226 - -
Acco03g2381 241 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 109 126 IPR020892 GO:0003755|GO:0006457
Acco03g2381 241 FunFam Peptidyl-prolyl cis-trans isomerase 46 232 - -
Acco03g2381 241 Gene3D - 45 232 IPR029000 -
Acco03g2381 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 IPR002130 GO:0000413|GO:0003755
Acco03g2381 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 IPR002130 GO:0000413|GO:0003755
Acco03g2381 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 185 200 IPR002130 GO:0000413|GO:0003755
Acco03g2381 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 93 IPR002130 GO:0000413|GO:0003755
Acco03g2381 241 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 184 IPR002130 GO:0000413|GO:0003755
Acco03g2381 241 SUPERFAMILY Cyclophilin-like 55 226 IPR029000 -
Acco03g2381 241 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 61 225 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2381 Acco-ChrAcco03 49440737 49444473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2381 72 220 U-box Gene Family AT5G67530 42.667 1.17e-25 103