Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco03g2365 | ATGCGCATAGAGTCCTCTATATATACCTGCGCGCGCTCGTGGCCCAGCGCAGACTTCTTCTGCATGGTGAAAACCTTTGAAATGAGTACCCAGCAGGAAGAAGAAAAGTCAAATCCTAAAGTCTACTTCGACATCACCATTGGTGACCAGCCCACCGGTCGCGTAGTGATCGAGCTCTTCGCTGATACCACCCCAAGGACCGCCGAGAATTTCCGTGCCCTCTGCACCGGCGAGAAGGGAGTCGGCCACAGCGGCAAGCCCCTTCACTACAAGGGCTCCACCTTCCACCGTTTGATCCCCGACTTCATGTGCCAGGGCGGTGACTTCACCGCCGGGAACGGCACCGGTGGCGAGTCGATTTACGGTGCCAAGTTCGAGGACGAGAACTTCGTGAAGAAGCACACCGGTCCCGGAGTGCTGTCCATGGCCAATTCCGGACCCGGAACCAACGGGTCGCAATTCTTCATCTGCACGACCGAGACGTCGTGGCTGGACGGCAAGCACGTGGTGTTCGGTCAGGTGGTGGAAGGCATGGACGTAGTGAGGGAGATCGAGAAGATCGGGTCAGGGTCCGGGAAGACCTCGAAGCCAGTGGTGATTGCCGACTGCGGTCAACTTTCTTAG | 624 | 0.5785 | MRIESSIYTCARSWPSADFFCMVKTFEMSTQQEEEKSNPKVYFDITIGDQPTGRVVIELFADTTPRTAENFRALCTGEKGVGHSGKPLHYKGSTFHRLIPDFMCQGGDFTAGNGTGGESIYGAKFEDENFVKKHTGPGVLSMANSGPGTNGSQFFICTTETSWLDGKHVVFGQVVEGMDVVREIEKIGSGSGKTSKPVVIADCGQLS | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco03g2365 | 207 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 59 | 74 | IPR002130 | GO:0000413|GO:0003755 | |
| Acco03g2365 | 207 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 95 | 107 | IPR002130 | GO:0000413|GO:0003755 | |
| Acco03g2365 | 207 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 153 | 165 | IPR002130 | GO:0000413|GO:0003755 | |
| Acco03g2365 | 207 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 166 | 181 | IPR002130 | GO:0000413|GO:0003755 | |
| Acco03g2365 | 207 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 138 | 153 | IPR002130 | GO:0000413|GO:0003755 | |
| Acco03g2365 | 207 | FunFam | Peptidyl-prolyl cis-trans isomerase | 34 | 207 | - | - | |
| Acco03g2365 | 207 | SUPERFAMILY | Cyclophilin-like | 36 | 206 | IPR029000 | - | |
| Acco03g2365 | 207 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 90 | 107 | IPR020892 | GO:0003755|GO:0006457 | |
| Acco03g2365 | 207 | PIRSF | Peptidylpro_ismrse | 22 | 207 | IPR024936 | GO:0003755 | |
| Acco03g2365 | 207 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 40 | 206 | - | - | |
| Acco03g2365 | 207 | CDD | cyclophilin_ABH_like | 39 | 204 | - | - | |
| Acco03g2365 | 207 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 42 | 205 | IPR002130 | GO:0000413|GO:0003755 | |
| Acco03g2365 | 207 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 42 | 204 | IPR002130 | GO:0000413|GO:0003755 | |
| Acco03g2365 | 207 | Gene3D | - | 26 | 207 | IPR029000 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco03g2365 | Acco-ChrAcco03 | 49360475 | 49361098 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco03g2365 | 10 | 187 | U-box Gene Family | AT5G67530 | 43.889 | 1.13e-32 | 121 |