Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2352 ATGGATTTATCTAACTCCTGCAGAGTTGCAGGCGAACAATTATCTTACAGTTTACACGAAAGTAACTCTGATAGAATTCATGAGATCAATGATGAAAAGTCTTTGCTTAACAAGAAACCTGGATGGTCCAAACGTAGTCTTACTTACGTAGGAGCCCATGATGTTTTCAGACCAGAGGTATGGAGGGCAGCTTTGACAGAGTTGGTAGCAACAACCTTATTAATGTTCAGTCTCACAATCTCCGTTATTGCATGCTTGGACTCACATGAGAGTGATCCGAAGCTTCTTGTTCCTTTTGCAGTATTCATAATAGCCTTCCTCTTCTTAATGGTCACTGTGCCTCTCTCTGGAGGGCACATGAGCCCTGTTTTCACCTTCATTGCTGCTTTAAAAGGAGTCATAACTCCTACACGTGCTCTTATGTACGTAATATCCCAATGCATTGGCTCTATTATTGGATTTCTCATCATTAAGACTGTGATGGACAAAAGATTAGCACATATATATTCCTTAGGAGGCTGTGCTATTGGTGATTTGAAGCAGCAAGAAGCTTTGTTAATAGAATTTTGCTGTACTTTTGTGGTTTTGTTTGTGGGAGTGACCATTGGTTTTGACAAGAAAATTTCCACTCATTTGGGGCTGCCAATGGTGTGTTTGGTGATTTCAGGAGCCATGGCCTTGGCTGTTTTTTTGTCTATTATTGTAACAGGACATGTTGGATATGCTGGTGTGGGCCTTAACCCAGCAAGGTGTTTGGGCCCAGCTTTACTTCGAGGACCCCAATTGTGGAATGGACATTGGGTTTTCATGGATTTAGAATCGCTCAACTCTCCAGTTGCATCAGAAGATGAGTGTACTAGTGGGTCTTCTGATCAAAACCATGAGCCAAATAAGTCTTTAGGATCGAAGCTTCTTGTTTCCATAGGTGCTCATGAATTTTTCAGTCCAGAGATGTGGAAGGCAGCTTTGACAGAGCTAATAGCAACAGCATGCTTATTGTTCACCTTGACCACTTCCATTATAGCATGCTTGGACTCACACGAAACTGATCCAAAGCTTCTTGTTCCTTTTGTAGTATTCATTATAGCCTTCCTCTTCTTACTTGTTACTGTCCCTCTCTCTGGAGGCCACATGAGCCCAGTTTTCACTTTCATAGCTGCTCTTAAAGGTTTCATATCTCCCTCTCGAGCCATCATTTACATATTCGCACAATGCATTGGCTCCATAATCTGCTTCTTGATCATTAAGACCGTCATGCTGCAAAAAACAGCAGATTCATATTACTTAGGAGGCTGTGTAATTAGTGACTTGAAGAAACAAAAAGCTTTGTTGTTAGAATTCTGCTGCACATTTGTGGTTCTTTTTGTGGGTGTGACTTTGGCTTTTGACAAGAAGAGGTCTAAGGATTTAGGTTTGCCAATGGTGTGTGTGGTGGTGGCAGCGGCCATGGCGGTGGCAGTGTTTGTGTCTATTACTGTGACTGGGCAGGCTGGGTATGCAGATGTGGGCCTGAGTCCAGCTAGATGTTTGGGCGAGGAGGCCCACTTTGGAATGGGCATTGGGTTTTCTGGGTTGGGCCCTTCTTGGCATGTCTTTTGTATTATGCTGTGTCCATCAACTTGCCGACGCAGGATTCGGTTCGAGTAG 1647 0.4323 MDLSNSCRVAGEQLSYSLHESNSDRIHEINDEKSLLNKKPGWSKRSLTYVGAHDVFRPEVWRAALTELVATTLLMFSLTISVIACLDSHESDPKLLVPFAVFIIAFLFLMVTVPLSGGHMSPVFTFIAALKGVITPTRALMYVISQCIGSIIGFLIIKTVMDKRLAHIYSLGGCAIGDLKQQEALLIEFCCTFVVLFVGVTIGFDKKISTHLGLPMVCLVISGAMALAVFLSIIVTGHVGYAGVGLNPARCLGPALLRGPQLWNGHWVFMDLESLNSPVASEDECTSGSSDQNHEPNKSLGSKLLVSIGAHEFFSPEMWKAALTELIATACLLFTLTTSIIACLDSHETDPKLLVPFVVFIIAFLFLLVTVPLSGGHMSPVFTFIAALKGFISPSRAIIYIFAQCIGSIICFLIIKTVMLQKTADSYYLGGCVISDLKKQKALLLEFCCTFVVLFVGVTLAFDKKRSKDLGLPMVCVVVAAAMAVAVFVSITVTGQAGYADVGLSPARCLGEEAHFGMGIGFSGLGPSWHVFCIMLCPSTCRRRIRFE 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2352 548 PRINTS Major intrinsic protein family signature 62 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g2352 548 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g2352 548 PRINTS Major intrinsic protein family signature 228 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g2352 548 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g2352 548 PRINTS Major intrinsic protein family signature 187 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g2352 548 PANTHER AQUAPORIN-LIKE 21 269 - -
Acco03g2352 548 Pfam Major intrinsic protein 58 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g2352 548 Pfam Major intrinsic protein 315 512 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g2352 548 Gene3D Glycerol uptake facilitator protein. 280 536 IPR023271 -
Acco03g2352 548 Gene3D Glycerol uptake facilitator protein. 20 273 IPR023271 -
Acco03g2352 548 SUPERFAMILY Aquaporin-like 60 270 IPR023271 -
Acco03g2352 548 SUPERFAMILY Aquaporin-like 311 511 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2352 Acco-ChrAcco03 49301823 49305848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2352 288 511 Major Intrinsic Protein MIP AT3G61430 25.108 1.59e-11 63.5