Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2342 ATGTCTACGGTTTCAAATTTCTCAACTTTATCATCTTCCCTTTCAAAACCTTCATCCTTCCCTGTCACCACACCCACCGCCAATACTTATTTCTGCGGCAAAACCCTACCAAAACCCTCTCTTTCTCTCTCCGCCGCAGACACGCGCAACACATCTTTTGCAGTTTCATCTAAAAATCCTATTGCCGGTCTCATTCGACAGGATAAGCCATACCCAGAACCTGAATCGGAATCGGAATCCTTGTACTTCGATGATGATGACGAAAAGCCCCGCGAGGAGTGTGGTGTGGTTGCTATATATGGTGATCCAGAGGCGTCTCGTCTCTGTTATTTGGCCCTTCACGCACTCCAACATCGTGGTCAAGAAGGTGCCGGAATCGTCTCTGTTAACGACAACATCCTTCAATCGGTTACGGGGTTAGGTCTTGTTTCTGATGTTTTTAATGAATCTAAGCTTGATAAATTACCTGGAAATTTGGCCATTGGGCATGTTCGGTATACAACCGCAGGCCAATCGATGCTCAAGAATGTTCAACCCTTTGTTGCAGGGTATCGATTTGGTTCTGTTGGTATCGCTCATAATGGTAATTTGGTGAATTATCGAAGCTTAAGGGCCAAACTTGAAAACAGTGGGTCGATTTTTAACACTAGTTCTGATACTGAGGTTGTTCTCCATCTCATTGCAACCTCAAAGCATAGGCCTTTTATATTGAGGATTGTTGACGCCTGTGAGCAGATTCAAGGGGCTTATTGTCTTGTTTTCGTAACCGAGGATAAGATTGTTGCAGTGAGGGACCCACATGGATTCCGTCCTCTGGTTATGGGGAGGAGAAGCAATGGAGCTATAGTGTTTGCCTCTGAAACTTGTGCTCTTGATTTAATTGAAGCAACCTTCGAAAGAGAGGTAGATCCTGGTGAAGTAATAGAGGTTGACAAAGATGGGATTCGATCTTTCTGTTTAATGTCTCATCCAGAGCCAAAACAATGCATCTTTGAGCATATATACTTTGCCCTCCCAAATTCTGTGGTTTTTGGAAGATCAGTGTACGAATCTAGAAGAAAATTTGGTGAAATTTTGGCAACTGACAGCCCAGTTGATTGTGATGTTGTGATAGCAGTTCCTGATTCTGGTGTTGTGGCTGCGCTCGGCTACGCTGAAAAAGCCGGAGTTCCTTTCCAACAAGGACTAATCAGGTCTCACTATGTAGGAAGGACATTCATTGAGCCATCACAGAAGATTAGAGACTTCGGAGTGAAGCTTAAGCTGGCACCGGTTCGAGCCGTGCTTGAGGGCAAGAGGGTTGTGGTGGTGGATGATTCAATTGTGAGAGGAACAACATCTTCCAAAATAGTGAGGATGATAAAAGAAGCAGGTGCTAAAGAAGTTCACATGAGGATTGCTAGTCCACCAATCATAGGATCGTGCTACTATGGGGTAGACACACCAAGTCCTGATGAGTTGATCTCTAACAGGATGACTACTGAGGAAATTAGGAAGTTCATTGGATCAGATTCACTTGCTTTTCTTCCTTTTGATAGCTTGAAGAAGTTGTTAGGCCATGATTCTTCTAATTTTTGTTATGCTTGCTTCTCTGGGAACTACCCTCTTGAACCTAAAGATCTGTTAGTGAAGAGGGTTGGTGACTTTGTTGATGATGGCTTAAATGGGAGCTTGGAGTCTATTGATGGAGGATGGCTTCATGCAAATTCGAACCCTAAAGAGCCCGAGGTCGTTGGTCTCTAA 1743 0.44 MSTVSNFSTLSSSLSKPSSFPVTTPTANTYFCGKTLPKPSLSLSAADTRNTSFAVSSKNPIAGLIRQDKPYPEPESESESLYFDDDDEKPREECGVVAIYGDPEASRLCYLALHALQHRGQEGAGIVSVNDNILQSVTGLGLVSDVFNESKLDKLPGNLAIGHVRYTTAGQSMLKNVQPFVAGYRFGSVGIAHNGNLVNYRSLRAKLENSGSIFNTSSDTEVVLHLIATSKHRPFILRIVDACEQIQGAYCLVFVTEDKIVAVRDPHGFRPLVMGRRSNGAIVFASETCALDLIEATFEREVDPGEVIEVDKDGIRSFCLMSHPEPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATDSPVDCDVVIAVPDSGVVAALGYAEKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLAPVRAVLEGKRVVVVDDSIVRGTTSSKIVRMIKEAGAKEVHMRIASPPIIGSCYYGVDTPSPDELISNRMTTEEIRKFIGSDSLAFLPFDSLKKLLGHDSSNFCYACFSGNYPLEPKDLLVKRVGDFVDDGLNGSLESIDGGWLHANSNPKEPEVVGL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2342 580 MobiDBLite consensus disorder prediction 64 87 - -
Acco03g2342 580 CDD GPATase_N 94 344 IPR035584 -
Acco03g2342 580 Hamap Amidophosphoribosyltransferase [purF]. 93 534 IPR005854 GO:0004044|GO:0009113
Acco03g2342 580 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 94 318 IPR029055 -
Acco03g2342 580 SUPERFAMILY PRTase-like 329 541 IPR029057 -
Acco03g2342 580 CDD PRTases_typeI 356 467 IPR000836 -
Acco03g2342 580 MobiDBLite consensus disorder prediction 1 21 - -
Acco03g2342 580 Pfam Phosphoribosyl transferase domain 353 463 IPR000836 -
Acco03g2342 580 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 94 535 IPR029055 -
Acco03g2342 580 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 92 540 - -
Acco03g2342 580 NCBIfam amidophosphoribosyltransferase 94 535 IPR005854 GO:0004044|GO:0009113
Acco03g2342 580 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 94 313 IPR017932 -
Acco03g2342 580 Gene3D - 353 517 IPR029057 -
Acco03g2342 580 Pfam Glutamine amidotransferase domain 175 291 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2342 Acco-ChrAcco03 49205667 49207409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2342 84 566 PRT Gene Family AT4G34740 81.818 0.0 830