Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2340 ATGGGCGACACTGAAGAAGCCCACACTGACATGATGCAGAATCTTCAATCCTTGTTCGGAACTTCATCGTCTTCGATTCTGAAACAACCTTTAAGCATGGACCAACTCAGTGCACCTCAATTCAACCCCTCACAAATGCGCGCGCGGCATTTTCCGCAGAATTTTGGCGGGGATGGTAATAATAACAAGAGACTGGGCATACCACCGTCACATCCCCACCAGATCCCTCCTATTTCCCCATATTCTCAGATCCCTGTGTCGCGACCCACGTCACAGCAAAATGTTAGCCCAGGACCTACTCATTCGCGATCATTATCACAGCCGCCATTTTTCTCGCTCGATTGTCTGCCTCCCTTAAGCCCCTCTCCTTTTCGAGACTCCACTTCAACTTCCATGTCAGACCCAGCTTCGGCTGATGTATCTATGGAGGATCGGGATGTAAGTTCGCATTCTTTATTGCCACCTTCACCTTTTACAAGGGGTAATCCTTCACGGGTTGGTGAAAATCTACCCCCGCGTAAAGCACATAGGCGCTCTAATAGTGATATTCCATTTGGCTTTTCTACTGTAATGCAATCTTCGCCTCCTTTTATTCCACTTAGGGGTTCTGGTGGACTAGATAGGTCATTGTCTGGGAGAGAAAATTCAGGTGCAGGTTTAGCTAAGCCTGCACAATTAGTTAAAAAGGAAACGAGTTGGGACAGAATTGTTGACCACAATATAGAGGGATCAGGTGAGAAGAAATCTCCTGAAGGGGAAGTTGTGGATGATCTCTTCTCTGCGTACATGAACTTAGATAACATTGATGCTCTTAACTCTTCGGGGACTGATGACAAAAATGGCAATGAAAATCGTGATGATTTGGATAGTAGAGCGAGTGGAACAAAGATAAATGGAGGTGATAGCAGTGATAACGAAGCAGAAAGTAGTGTCAACGAAACTGGGGCCAATATGCAAAGACAGGGAACCAAATCTTCAAGTGAAATGAAGGAAGGTGGGAAAAGGAGTGCGGGAGGAGACATTGCACCCACCACAAGACACTACAGAAGTGTCTCAATGGATAGTTTCATCGGGAAGTTAAACTTTGCTGATGACTGCCCTAAACTGCCGCCATCTCCAGGTCCTCGTCCTGGGCAGCTTTCTCCCACCAATTCAATTGATGGTAATTCATCTGCCTTTAGCTTGGAGTTTGGAAATGGAGAATTTAGCGGGGCGGAATTGAAGAAAATTATGGCCAATGAAAAACTTGCTGAGATTGCTTTAACTGACCCTAAGCGGGCAAAAAGGATTTTGGCAAATAGACAATCAGCTGCACGTTCTAAAGAACGGAAGATGCGATACATTTCTGAACTAGAACACAAGGTTCAGACTCTACAGACTGAAGCTACCACGCTGTCTGCGCAACTGACCCTGTTACAGAGAGATTCCGTGGGGCTCACAAACCAGAATAATGAGCTGAAGTTTCGCCTTCAAGCGATGGAACAACAGGCAAAACTCCGAGATGCATTAAATGAAGCTCTAACTACTGAGGTTCAACGACTTAAACTCGCTACGGCCGAGTTGAATGGTGAATCTCATGCTTCTGGCTGCATGATCCCGCAGCATTCTATGGACCCTCAGATGTTTCAGTCGCAGAGGCAGCAATCACAGGCATGCCAATCAAACATTCAGATGCAGCAACAGCAGCAGCATCAGCAGAACAGTAGTGCTCCCCCAAAAACCGACTCAAAACAGTAG 1737 0.4623 MGDTEEAHTDMMQNLQSLFGTSSSSILKQPLSMDQLSAPQFNPSQMRARHFPQNFGGDGNNNKRLGIPPSHPHQIPPISPYSQIPVSRPTSQQNVSPGPTHSRSLSQPPFFSLDCLPPLSPSPFRDSTSTSMSDPASADVSMEDRDVSSHSLLPPSPFTRGNPSRVGENLPPRKAHRRSNSDIPFGFSTVMQSSPPFIPLRGSGGLDRSLSGRENSGAGLAKPAQLVKKETSWDRIVDHNIEGSGEKKSPEGEVVDDLFSAYMNLDNIDALNSSGTDDKNGNENRDDLDSRASGTKINGGDSSDNEAESSVNETGANMQRQGTKSSSEMKEGGKRSAGGDIAPTTRHYRSVSMDSFIGKLNFADDCPKLPPSPGPRPGQLSPTNSIDGNSSAFSLEFGNGEFSGAELKKIMANEKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAKLRDALNEALTTEVQRLKLATAELNGESHASGCMIPQHSMDPQMFQSQRQQSQACQSNIQMQQQQQHQQNSSAPPKTDSKQ 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2340 578 SMART brlzneu 421 485 IPR004827 GO:0003700|GO:0006355
Acco03g2340 578 SUPERFAMILY Leucine zipper domain 425 476 IPR046347 GO:0003700|GO:0006355
Acco03g2340 578 MobiDBLite consensus disorder prediction 527 578 - -
Acco03g2340 578 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 423 486 IPR004827 GO:0003700|GO:0006355
Acco03g2340 578 MobiDBLite consensus disorder prediction 84 109 - -
Acco03g2340 578 Gene3D - 424 476 - -
Acco03g2340 578 MobiDBLite consensus disorder prediction 122 137 - -
Acco03g2340 578 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 104 569 - -
Acco03g2340 578 MobiDBLite consensus disorder prediction 271 346 - -
Acco03g2340 578 MobiDBLite consensus disorder prediction 364 387 - -
Acco03g2340 578 CDD bZIP_plant_RF2 426 475 IPR044759 GO:0003700|GO:0006355
Acco03g2340 578 MobiDBLite consensus disorder prediction 47 184 - -
Acco03g2340 578 MobiDBLite consensus disorder prediction 537 578 - -
Acco03g2340 578 Coils Coil 441 496 - -
Acco03g2340 578 MobiDBLite consensus disorder prediction 201 226 - -
Acco03g2340 578 Pfam bZIP transcription factor 425 479 IPR004827 GO:0003700|GO:0006355
Acco03g2340 578 Coils Coil 504 524 - -
Acco03g2340 578 MobiDBLite consensus disorder prediction 295 326 - -
Acco03g2340 578 FunFam probable transcription factor PosF21 424 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2340 Acco-ChrAcco03 49198247 49201544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2340 1 543 bZIP Transcription Factor Family AT4G38900 60.676 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco03g2340 bZIP_1 7.1e-09 CL0018