Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2338 ATGATTCCCACGTCCTTCCTTCCTTTTCTGACCGGTAAACATAATTGTACAGAGAGAGAGCCCGAGAAAGATCGAAACTTTGAAGATCTCTGTGAAGAAATAGACTTTCCAGATCTATCCGACGTCGTTGTAGATCCGTATCCGATAATGGGTTCGTTCAGCGGCGATGAGACGGCACCGTTTTTTGGTTTCCTCGGAGCCGCAGCAGCGCTCGTTTTCTCCTGTATGGGAGCTGCCTATGGCACAGCAAAGAGTGGAGTTGGTGTGGCTTCGATGGGTGTGATGAGACCTGAGTTGGTAATGAAGTCCATAGTCCCAGTTGTTATGGCTGGAGTTTTGGGTATTTATGGCCTTATTATTGCGGTTATAATTAGTACTGGCATAAACCCTAAGGCCAAATCTTATTACCTCTTTGATGGGTATGCGCATCTCTCCTCCGGTCTTGCCTGTGGACTTGCTGGCCTTTCTGCTGGAATGGCTATTGGCATTGTCGGCGATGCTGGTGTGAGAGCTAATGCACAGCAGCCAAAACTTTTTGTTGGAATGATTCTCATCCTGATCTTTGCTGAAGCTCTTGCTCTGTACGGTCTCATTGTTGGTATTATCCTGTCTTCTCGTGCTGGCCAGTCCAGAGCTGAGTAG 642 0.4766 MIPTSFLPFLTGKHNCTEREPEKDRNFEDLCEEIDFPDLSDVVVDPYPIMGSFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2338 213 SUPERFAMILY F1F0 ATP synthase subunit C 135 204 IPR035921 -
Acco03g2338 213 NCBIfam V-type ATPase subunit C 61 169 IPR011555 GO:0033179|GO:0046961|GO:1902600
Acco03g2338 213 Gene3D - 59 210 IPR035921 -
Acco03g2338 213 CDD ATP-synt_Vo_c_ATP6C_rpt2 137 204 - -
Acco03g2338 213 PRINTS Vacuolar ATP synthase 16kDa subunit signature 78 102 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco03g2338 213 PRINTS Vacuolar ATP synthase 16kDa subunit signature 182 205 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco03g2338 213 PRINTS Vacuolar ATP synthase 16kDa subunit signature 104 128 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco03g2338 213 PRINTS Vacuolar ATP synthase 16kDa subunit signature 155 181 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco03g2338 213 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 52 209 - -
Acco03g2338 213 FunFam V-type proton ATPase proteolipid subunit 59 210 - -
Acco03g2338 213 Pfam ATP synthase subunit C 65 124 IPR002379 GO:0015078|GO:0033177|GO:1902600
Acco03g2338 213 Pfam ATP synthase subunit C 145 203 IPR002379 GO:0015078|GO:0033177|GO:1902600
Acco03g2338 213 CDD ATP-synt_Vo_c_ATP6C_rpt1 61 128 - -
Acco03g2338 213 SUPERFAMILY F1F0 ATP synthase subunit C 62 125 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2338 Acco-ChrAcco03 49176832 49178528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2338 50 213 Primary Pumps ATPases(2) AT2G16510 98.780 2.66e-110 311