Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2321 ATGCTTCCAAAAGGCCACGAATCTAACAAGCTCAGACTTTTAAGCGTACGTAACAGGTCACAAACAGATCTTCACCGTTCATTTGAAATGAAATTCAAAGAACCGCCGTTAGATGCTTCACGCGCCAATCAGTCAGAATTGTATGACGTGGTCATCGCCGCCGTCTTTGCATTGCATTACCCAGTTTATAAAATTAGCCTAGCACGAGGCGCGATCAACGCGGCGACGCAATCCCTCTTTCAAATGGAGGTTGTGACAGCGAACGCGTTAAAATCGAGTTTGCATAGAGAATTGGCGTGGCTGAAATCGACACAGCAAGCCTTTAGCGAGGAAATTAGGTGCTTCAATTCGAATAACGTTGCCGCCAGTGAGGATTTCTCGGTGGACGACCTATTCGATTTTTCTCAGAGTGAATTTCAACCTGAATATGAGGAAGAGGACGAGGAAAAAGACAGTCTCTCTGGTTCCTCCTCACATGACCGGAGCGAAGAAGACACAAACTCCAATTCCTCTTCCGGTCTCGCCGATTTTGGCTTCGTTTTTTCTAACGAACTCACCGTTCCGGACGATGATTTGGCTGACTTAGAGTGGGTTTCTCATTTCGTTGACGACTCTGTCCCGGAGCTTTCTCTTCTGTACCCCGTCCGTTCCGAGGGAACGAAGACCGGGTCTGAACCGGAACCTAGCCCTGGTTTTGCGAAAACTCCTTGTTTTCCCTTTCAATTTCCTGTCAAGGCAAGAAGCACCAAGCGTAGAAGAGCCAGAACGTTCGGCCCTTCGTTTTCCCGACCATCTTCGCCGCCGTCTTCGTGTTCATCGGTATTTTCCTCGTCGTTGACTCTTACCACCATCGGCGCGGCTCCAAACACTGCCTTTTCACATGCCGTTGCGGAACCGCCCGTGAAAAAGCAGAAGAAAAGGGCGGAGGCTCAATCCGGTAGTGGTGGTGGGTCCCAGATTCAGCGTCGGTGCACCCATTGCCAGGTGCAGAAGACTCCACAATGGAGAACAGGTCCACTAGGCCCGAAAACCCTTTGTAACGCTTGTGGAGTCCGGTTCAAGTCCGGTCGGCTTTTTCCGGAGTATAGACCGGCCTGTAGCCCAACTTTCTCTAGCGAAGTTCACTCGAACAGCCATCGTAAAGTGGTAGAGATGAGGAAGAGGAAGGAGATGAGCGAACCGGAATGTGGGTTGACTCAAAGCTCAAACTGTTCAGAGGTGCTGAGCTTCTAG 1233 0.5028 MLPKGHESNKLRLLSVRNRSQTDLHRSFEMKFKEPPLDASRANQSELYDVVIAAVFALHYPVYKISLARGAINAATQSLFQMEVVTANALKSSLHRELAWLKSTQQAFSEEIRCFNSNNVAASEDFSVDDLFDFSQSEFQPEYEEEDEEKDSLSGSSSHDRSEEDTNSNSSSGLADFGFVFSNELTVPDDDLADLEWVSHFVDDSVPELSLLYPVRSEGTKTGSEPEPSPGFAKTPCFPFQFPVKARSTKRRRARTFGPSFSRPSSPPSSCSSVFSSSLTLTTIGAAPNTAFSHAVAEPPVKKQKKRAEAQSGSGGGSQIQRRCTHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSSEVHSNSHRKVVEMRKRKEMSEPECGLTQSSNCSEVLSF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2321 410 MobiDBLite consensus disorder prediction 152 166 - -
Acco03g2321 410 FunFam GATA transcription factor 316 400 - -
Acco03g2321 410 CDD ZnF_GATA 323 380 IPR000679 GO:0006355|GO:0043565
Acco03g2321 410 ProSitePatterns GATA-type zinc finger domain. 324 349 IPR000679 GO:0006355|GO:0043565
Acco03g2321 410 ProSiteProfiles GATA-type zinc finger domain profile. 318 354 IPR000679 GO:0006355|GO:0043565
Acco03g2321 410 PANTHER GATA TRANSCRIPTION FACTOR 116 391 - -
Acco03g2321 410 SMART GATA_3 318 372 IPR000679 GO:0006355|GO:0043565
Acco03g2321 410 Gene3D - 317 392 IPR013088 GO:0006355|GO:0008270
Acco03g2321 410 MobiDBLite consensus disorder prediction 295 320 - -
Acco03g2321 410 MobiDBLite consensus disorder prediction 139 171 - -
Acco03g2321 410 Pfam GATA zinc finger 324 357 IPR000679 GO:0006355|GO:0043565
Acco03g2321 410 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 320 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2321 Acco-ChrAcco03 49043391 49045513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2321 89 400 C2C2-Gata Transcription Factor Family AT5G66320 42.727 1.31e-60 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Acco03g2321 GATA 8.2e-16 CL0167