Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2310 ATGGAAGCTGGACAAGTAGAGAGGAGTAAGTGCCAAGACTGTGGGAACCAAGCGAAGAAAGGTTGTGAGTACAAGAGATGTAGAAGTTGCTGCAACAGCAAAGGGTTTGAGTGTGAAACTCATGTTCACAGCACTTGGGTTCCTCTATATAATAGAAGACGCCATAGGAATCATCATCATCCTCATAATTTCACTAAAAGGCACAAACACAACGTCCCCTATCCCCCACCAGATGAAAAGGAGGAGTTGAAGTTTCCAGAATGGGTGAGTATGAAGGCAATATTTAGGTGCCTACAAGTGCGATCAAAGGATGATTGGGTGAATGAATTTGCTTACCATACTTCAGTGAGGATTGGAGGGCATGTGTTTTGTGGTCTTCTTCATGATCAAGGCCCTTCTCATGGTGGTTTTGGTGAGACTTGTTCAGTTCCTCTTGTTCTTCAGCATAATGACAATCTAACCAACGCAGCCACACAGACGAGCCATATTGATGCTGCAACAGTAATGGCTCCTCCATTATCATCTTCTTCTTCTGCTCCTGACTCTATCTTTCAATATCCACCATATCCTTTTACCCTACCTCCTATGCCTTATTTCTCCAACCCCCAATCTTAG 615 0.4374 MEAGQVERSKCQDCGNQAKKGCEYKRCRSCCNSKGFECETHVHSTWVPLYNRRRHRNHHHPHNFTKRHKHNVPYPPPDEKEELKFPEWVSMKAIFRCLQVRSKDDWVNEFAYHTSVRIGGHVFCGLLHDQGPSHGGFGETCSVPLVLQHNDNLTNAATQTSHIDAATVMAPPLSSSSSAPDSIFQYPPYPFTLPPMPYFSNPQS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2310 204 MobiDBLite consensus disorder prediction 57 78 - -
Acco03g2310 204 NCBIfam putative zinc finger domain, LRP1 type 10 52 IPR006510 -
Acco03g2310 204 Pfam Domain of unknown function (DUF702) 9 133 - -
Acco03g2310 204 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 6 174 IPR007818 GO:0003700|GO:0006355
Acco03g2310 204 NCBIfam LRP1 C-terminal domain 84 132 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2310 Acco-ChrAcco03 48870049 48871264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2310 10 131 C2H2 Transcription Factor Family AT2G21400 46.565 3.61e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Acco03g2310 DUF702 2.5e-39 No_clan