Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2302 ATGGCAACTTATTTGCCAAATTCATATTCTGAGATACCAATTACCTCTAGTAATATAACTTTATATATGAACACTGGTTCATATCCAGAGGCATTCTCTGGCAATTCTCAGGAGCAAAATGGCTGCTTTGTGATCCCACCAATGAGTTTATCACAATCAGCCCCGGAACAACAAGAAATCTTAGCGAATCTCGGTGGGTTACAAACTGGGGACTATGATTTCTCTGCATGGAGACAAGGAAGAAATGAGATGCTAGTAACAAATCCAATGGATGGACATAACTTGCAGAGCCAGGGATTATCTCTCAGCCTTGGAACCCAAACACCAACAGGAATCCAAATTTCTCCTTTCCATGATCAAAGTTCGAATGCGAGTTTCGATTCACTTTTAGGTCAAAATCCATCGATTTCTGGCCATAAAAGCAGCTCATCTAGGCATGAGTGTACGAGGCACAGTGAAATTTTGCCTCCTGATTTACCTGAAGCTAGTCAAGTTTTGAATAGAGGGGATTATTCTTTGCATGGTGGGACGCCAAGTGTTTCAAGAACAATTCCTAATTCCAAGTACCTCAAGGCAGCACAAGAGCTACTTGATGAAGTTGTTGACATCCAAAAAGCACTAAAACAAAGTCCTAGCACACGTGAGAAAAAGACTTCTAAGGAGAATGATGGGAGACTAGAAAATGAAAGGGCGCCTGCTGATGGAGAGCCTAACCCTCAAGATTTAGACGGCAACACCTCTTGTGAGATTTCGAATGCTGAAAGACAAGACCTGCAGAACAAGTTAACAAAGCTATTATCGATGCTGGATGAGGTTCACAGTAGGTACAAACAATATTATCATCAGATGCAGATTGTGGTATCATCATTTGATGTGATAGCAGGACGTGGTGCGGCCAAACCATACACGGCACTAGCGCTGCAAACCATTTCGCGCCATTTCCGGTGCTTGCATGATGCAATCACCGGGCAGATCAGCGCGACACAGAAGAGCCTTGGAGAGCAAGATTCTGCAGGAAACAATAAAGGAGTTGGAATATCAAGACTCCGGTACGTTGACCAACAAATCCGGCAACAAAGGGCTCTCCAGCAGCTTGGAGTGATGCATCATGCATGGAGACCGCAAAGGGGACTACCAGAAAACTCTGTTTCGATTCTTCGCGCTTGGCTTTTTGAACATTTCCTTCATCCCTATCCCAAAGATTCTGAGAAGGCAATGCTAGCAAGGCAGACAGGTTTGACTAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGAGTTCGTCTTTGGAAACCTATGATTGAAGAGATGTACAAGGAAGAAATTGAAAATGTGGACCTGCACTCAAGTTCTTCAACTGAAGAAGCATCCAAGGTAAGCAAAAGCGATGTCAAGATCTCCGACGACGGGTGTGATGACTTACAACAAAGTCAAAGTTCAATAGCCGACAAGAACAGCAACATTGGACAAACTAAGGACTTGAGATCTGAGAAGCAAACTGAGGAGCAACAAAGACTCGGCTTTGACGACTGTAGAGTCTTCCAAGAGGGCACAGTTGTTCAGACCAATGAAGGTGGTGCAGGGTTTGTGGCGGTTGCTCCAGCGTGCCAAATGTCCGAGTTGGGGCGGTTTCAGCCTGGAAACGGCGTATCACTGACATTAGGATTGCAGCATTGTGAAGTTGGTAATTATATGTCCGGTGAGAGCCGTCGTAGCTTCGTTGTTATGAGGGAAGATGGTACCATTGGAGCTCAGACCTCAGAACTTGATTATGTAGCTGCTGGAAACCAGCACCAAAGGTTCACTTCTCCACATTAA 1818 0.445 MATYLPNSYSEIPITSSNITLYMNTGSYPEAFSGNSQEQNGCFVIPPMSLSQSAPEQQEILANLGGLQTGDYDFSAWRQGRNEMLVTNPMDGHNLQSQGLSLSLGTQTPTGIQISPFHDQSSNASFDSLLGQNPSISGHKSSSSRHECTRHSEILPPDLPEASQVLNRGDYSLHGGTPSVSRTIPNSKYLKAAQELLDEVVDIQKALKQSPSTREKKTSKENDGRLENERAPADGEPNPQDLDGNTSCEISNAERQDLQNKLTKLLSMLDEVHSRYKQYYHQMQIVVSSFDVIAGRGAAKPYTALALQTISRHFRCLHDAITGQISATQKSLGEQDSAGNNKGVGISRLRYVDQQIRQQRALQQLGVMHHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEEIENVDLHSSSSTEEASKVSKSDVKISDDGCDDLQQSQSSIADKNSNIGQTKDLRSEKQTEEQQRLGFDDCRVFQEGTVVQTNEGGAGFVAVAPACQMSELGRFQPGNGVSLTLGLQHCEVGNYMSGESRRSFVVMREDGTIGAQTSELDYVAAGNQHQRFTSPH 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2302 605 Gene3D - 368 445 - -
Acco03g2302 605 MobiDBLite consensus disorder prediction 123 162 - -
Acco03g2302 605 SMART prehox3 178 323 IPR006563 -
Acco03g2302 605 ProSiteProfiles 'Homeobox' domain profile. 369 432 IPR001356 GO:0003677
Acco03g2302 605 Coils Coil 255 275 - -
Acco03g2302 605 MobiDBLite consensus disorder prediction 471 489 - -
Acco03g2302 605 FunFam BEL1-like homeodomain protein 9 375 437 - -
Acco03g2302 605 SMART HOX_1 372 436 IPR001356 GO:0003677
Acco03g2302 605 CDD homeodomain 372 433 IPR001356 GO:0003677
Acco03g2302 605 SUPERFAMILY Homeodomain-like 373 439 IPR009057 -
Acco03g2302 605 MobiDBLite consensus disorder prediction 445 503 - -
Acco03g2302 605 MobiDBLite consensus disorder prediction 207 247 - -
Acco03g2302 605 Pfam Homeobox KN domain 389 428 IPR008422 GO:0003677|GO:0006355
Acco03g2302 605 MobiDBLite consensus disorder prediction 209 236 - -
Acco03g2302 605 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 118 455 - -
Acco03g2302 605 MobiDBLite consensus disorder prediction 123 142 - -
Acco03g2302 605 Pfam Associated with HOX 184 322 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2302 Acco-ChrAcco03 48801693 48804936 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2302 53 603 Homeobox Transcription Factor Family AT4G34610 45.760 9.33e-130 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Acco03g2302 POX 8.4e-49 No_clan