Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2296 ATGCTGACAGAACTCTGTTTTGGAGGAATCATAGTTTTAGCTATTGTTTTACAAGTGCTGATGTCTCATAACCATAAACTATTGGGACGTGGTGCGGCCAAACCATACACGGCACTAGCGCTGCAAACCATTTCGCGCCATTTCCGGTGCTTGCATGATGCAATCACCGGGCAGATCAGCGCGACACAGAAGAGCCTTGGAGAGCAAGATTCTGCAGGAAACAATAAAGGAGTTGGAATATCAAGACTCCGGTACGTTGACCAACAAATCCGGCAACAAAGGGCTCTCCAGCAGCTTGGAGTGATGCATCATGCATGGAGGCCACAAAGGGGACTACCAGAAAACTCTGTTTCAATTCTTCGCGCTTGGCTTTTTGAACATTTCCTTCATCCCTATCCCAAAGATTCTGAGAAGGCAATGCTAGCAAGGCAGACAGGTTTGACTAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGAGTTCGTCTTTGGAAACCTATGATTGAAGAGATGTACAAGGAAGAAATTGAAAATGTGGACCTGCACTCAAGTTCTTCAACTGAAGAAGCATCCAAGGTAAGCAAAAGCGATGTCAAGATCTCGGCCGACGACGGGTGTGATGACTTACAACAAAGTCAAAGTTCAATAGCCGACAAGAACAGCAACATTGGACAAACTAAGGACTTGAGATCTGATAAGCAAACTGAGGAGCAACAAAGGCTCAGCTTTGACGACTGTAGTGTCTTCCAAGATGAAACAGTTGTTCAGACCAATGAAGGCGGCACAGGGTTTGTGGCGGTTGCTCCGGCGTGCCAAATGTCTGAGTTGGGGCGGTTTCAACCTGGAAACGGCGTGTCACTGACATTAGGATTGCAGCATTGTGAAGTTGGTAATTATATGTCCGGTGAGAGCCGTCGTAGATTCGTTGTTATGAGGGAGGATGGTACCATTGGAGCTCAGACCTCAGAACTTGATTATGTAGCTGCTGGAAACCAGCACCAAAGGTTCACTTCGCCACATTAA 1023 0.4633 MLTELCFGGIIVLAIVLQVLMSHNHKLLGRGAAKPYTALALQTISRHFRCLHDAITGQISATQKSLGEQDSAGNNKGVGISRLRYVDQQIRQQRALQQLGVMHHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEEIENVDLHSSSSTEEASKVSKSDVKISADDGCDDLQQSQSSIADKNSNIGQTKDLRSDKQTEEQQRLSFDDCSVFQDETVVQTNEGGTGFVAVAPACQMSELGRFQPGNGVSLTLGLQHCEVGNYMSGESRRRFVVMREDGTIGAQTSELDYVAAGNQHQRFTSPH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2296 340 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 18 190 - -
Acco03g2296 340 Gene3D - 102 180 - -
Acco03g2296 340 SUPERFAMILY Homeodomain-like 107 173 IPR009057 -
Acco03g2296 340 ProSiteProfiles 'Homeobox' domain profile. 103 166 IPR001356 GO:0003677
Acco03g2296 340 SMART HOX_1 106 170 IPR001356 GO:0003677
Acco03g2296 340 Pfam Homeobox KN domain 123 162 IPR008422 GO:0003677|GO:0006355
Acco03g2296 340 MobiDBLite consensus disorder prediction 225 240 - -
Acco03g2296 340 MobiDBLite consensus disorder prediction 209 224 - -
Acco03g2296 340 FunFam BEL1-like homeodomain protein 4 109 171 - -
Acco03g2296 340 Pfam Associated with HOX 18 56 IPR006563 -
Acco03g2296 340 MobiDBLite consensus disorder prediction 179 198 - -
Acco03g2296 340 CDD homeodomain 106 167 IPR001356 GO:0003677
Acco03g2296 340 MobiDBLite consensus disorder prediction 209 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2296 Acco-ChrAcco03 48754098 48756156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2296 17 205 Homeobox Transcription Factor Family AT2G16400 65.128 1.74e-85 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Acco03g2296 Homeobox_KN 1.2e-17 CL0123