Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2284 ATGGCTTCATCTAGTGGAACGTCTTCTGGATCGTCGTCTCTGATTCGAAACTCTGGTTCAGATGAGGACCTGCAGGTTTTGATGGATCAGAGGAAGAGGAAGAGGATGATATCGAATCGTGAATCGGCGAGAAGATCGAGGATGAGGAAACAGAAGCATCTGGATGATCTGGTGGCTCAGGTGGCTCAGCTGAGGAATGAGAATCAGAAGATTCTCGCAACTGTAAATCTCACAAACCAGCAATATCTAACCGTCGAGGCTGAGAATTCTGTGCTCAGAGCCCAAGCCAACGAACTCACACACAGATTGCAATCTCTGAACGAAATTGTGGATTTCGTCAACACAAATTCTGCAGTTTCATCATTATCATCAGCCACCTTCATGGAATTCACCAACAGCTTCTTCTTCAACAACAACAATCCATTAAACATGGCCTACCACCTGAACCAACCGATCATGGCTTCTCCTGACATGTTTCACGAGTACTGTTGA 492 0.4553 MASSSGTSSGSSSLIRNSGSDEDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAQLRNENQKILATVNLTNQQYLTVEAENSVLRAQANELTHRLQSLNEIVDFVNTNSAVSSLSSATFMEFTNSFFFNNNNPLNMAYHLNQPIMASPDMFHEYC 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2284 163 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Acco03g2284 163 Coils Coil 89 109 - -
Acco03g2284 163 MobiDBLite consensus disorder prediction 25 51 - -
Acco03g2284 163 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Acco03g2284 163 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Acco03g2284 163 Coils Coil 47 81 - -
Acco03g2284 163 MobiDBLite consensus disorder prediction 1 51 - -
Acco03g2284 163 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Acco03g2284 163 MobiDBLite consensus disorder prediction 1 24 - -
Acco03g2284 163 FunFam Basic region/leucine zipper protein 29 111 - -
Acco03g2284 163 Pfam bZIP transcription factor 31 82 IPR004827 GO:0003700|GO:0006355
Acco03g2284 163 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 156 - -
Acco03g2284 163 Gene3D - 29 84 - -
Acco03g2284 163 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2284 Acco-ChrAcco03 48661464 48661955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2284 27 157 bZIP Transcription Factor Family AT4G34590 56.296 7.23e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco03g2284 bZIP_1 5.3e-10 CL0018