Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2260 ATGCACACTCCCAAATCTGAGCTTGTGAGTGAGAGTGAAAGCAAAAGAATAATGGCATCTTCATCATCATCATCATCAAGTAGTGTAAGGAGAGAGAAGAATGATACAGAGATGTGTTTTTGGACAGAGAAACAGAACAAGGTGTTTGAGAAGGCACTGGCAAAGTACGATGAAGATACACCAGAAAGGTGGGAGAAAGTGGCAAGAGAAGTTGGAGGAGGAAAATCTGCACAACAAGTTCAAAGACATTATCAGATTCTGTTGCATGATCTCTCACACATTGAATCTGGACTTGTTCCTATTCCTAATTATAAATCTTTATCACCCTCCTCCGTGCTTGATCACCAGGACTGGTATTTTTCTCTTCTGCAACTCAATTTCAAGCTATAG 390 0.4026 MHTPKSELVSESESKRIMASSSSSSSSSVRREKNDTEMCFWTEKQNKVFEKALAKYDEDTPERWEKVAREVGGGKSAQQVQRHYQILLHDLSHIESGLVPIPNYKSLSPSSVLDHQDWYFSLLQLNFKL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2260 129 FunFam Transcription factor SRM1 33 101 - -
Acco03g2260 129 SMART sant 37 90 IPR001005 -
Acco03g2260 129 MobiDBLite consensus disorder prediction 13 29 - -
Acco03g2260 129 MobiDBLite consensus disorder prediction 1 33 - -
Acco03g2260 129 Pfam Myb-like DNA-binding domain 41 85 IPR001005 -
Acco03g2260 129 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 18 109 IPR044636 GO:0003700
Acco03g2260 129 CDD SANT 41 88 IPR001005 -
Acco03g2260 129 Gene3D - 40 91 - -
Acco03g2260 129 SUPERFAMILY Homeodomain-like 41 96 IPR009057 -
Acco03g2260 129 ProSiteProfiles Myb-like domain profile. 41 88 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2260 Acco-ChrAcco03 48459172 48459561 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco03g2260 Myb_DNA-binding 1.5e-06 CL0123