Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2258 ATGGCGGCCGCAGATGTTGAATACAGGTGCTTTGTCGGGGGGCTCGCATGGGCCACCGACAGCGAGGCCCTTGAGAAGGCCTTTGCTCCGTTTGGCGAGATCATCGAATCGAAGGTTATTAACGATCGTGAGACTGGTAGGTCAAGAGGGTTCGGATTCGTAACCTTCTCGTCTGAGCAGGCCATGAGAGATGCTATTGAGGGGATGAACGGTCAGGATCTCGATGGCCGTAATATTACTGTGAACGAGGCCCAAAATCGTGGCCGTGGAGGTGGCGGCGGCGGCGGTGGATACGGTGGCGGAGGTGGTGGATACGGTGGTGGTGGTGGTGGATATAGCCGTGGTGGGGGAGGATACGGAGGTGGAGGCCGCCGTGAAGGTGGATACAATCGTAACGGTGGTGGAGGCTATGGAGGAGGCGGCGGCGGCTACGGTGGTGGTTATGGTGGTGGACGTGACCGTGGGTATGGTGGTGGTGATGGTGGATCTCGCCACTCCAGAGGCGGTGGTGCCTCTGATGGAAGCTGGAGAAACTAG 537 0.5903 MAAADVEYRCFVGGLAWATDSEALEKAFAPFGEIIESKVINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQNRGRGGGGGGGGYGGGGGGYGGGGGGYSRGGGGYGGGGRREGGYNRNGGGGYGGGGGGYGGGYGGGRDRGYGGGDGGSRHSRGGGASDGSWRN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2258 178 SMART rrm1_1 9 82 IPR000504 GO:0003723
Acco03g2258 178 MobiDBLite consensus disorder prediction 83 104 - -
Acco03g2258 178 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 158 - -
Acco03g2258 178 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Acco03g2258 178 MobiDBLite consensus disorder prediction 120 178 - -
Acco03g2258 178 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Acco03g2258 178 FunFam Glycine-rich RNA-binding protein GRP1A 2 113 - -
Acco03g2258 178 CDD RRM2_NsCP33_like 9 84 - -
Acco03g2258 178 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Acco03g2258 178 Gene3D - 2 106 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2258 Acco-ChrAcco03 48439296 48440108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2258 10 81 Eukaryotic Initiation Factors Gene Family AT2G23350 40.278 2.08e-10 57.0