Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2257 ATGGTGGATCATCAGCGAAACTTAGTGTCTCTTGGGTTCATGTTCTTGTTGCTTTTTCAGTTCACATTTGAACAGCTCGAGCCTCTCAGTTCACCCACAGAGCGACTCGCTCTACTTCAACTTCGATCTTCCTTGGGCTTGAGATGCAGGGAATGGCCAATAAAAGCCGACCCTTGCTTAATCTGGAATGGCGTAAGCTGTGAGAATGGCAGAGTCACTGGGATCAATATTTCTGGGTTTAGAAGAACGAGACTTGGGAGGCAAAACCCACAATTCTCTGTTGATGCTTTAGCCAATTTGACCTTCCTGCAATCATTCAATGCGTCCAAGTTTCTTCTTCCTGGTCCTATTCCCCACTGGTTTGGCCAAGAGCTTTCTTCACTCAAAGTGCTTGATCTTCGTTCTTGCTCCATCACTGGTGCAATTCCTTCTACGCTTGGGAATCTGATAAGCCTAACCACTCTCTATTTATCTGATAACAACCTCACCGGGATCATTCCTGATAGTCTAAGTCAACTTTCGGCCATTTCTGTTCTTGATCTTTCCCGGAATTCTCTCTCAGGATCGTTGCCCGCATCCTTTGTCTCTCTTGGGAATCTTTCTTTCCTTGACATTTCTTCCAACTATTTATCCGGGTCTATTCCCCAACGCATTGGGTCACTTTCTAAATTACAATACTTGAATCTTTCAAACAATGGTCTAACTTCTTCTATACCTGCTCAACTTGGGGATCTTAGTAACTTAGTTGACCTTGATCTAAGTGATAATTCCTTGTACGGTCTGGTGCCTCCGGATTTAATGGGGTTAAGGAGCTTGCAGAGAATGAAGCTTGGGAACAACATTCTTGAAGGACCTTTGCCCGAGAACTCGTTTCATACTACTTCGCGGTTGCAGTTCATAGAGCTGAGAAAAAATAATTTTACTGGGACCTTGTCTGATGAGTTGTGGTATCTTCCAAGATTGAGCTTTGTGGATGTCTCCAGTAATTACTTCACTGGCGTGCTTCCTAGTTCTAGTTCCACTGCTAATGCCACTACTACAATTAAGGGAAATATTTCTCATAATCTATTTTATGGAAGCCTCACTCCTCTGCTCAAAAGGTTCAGTTTCATTGATCTGTCAAGCAATTATTTTGAGGGCAAGGTTCTGGATTTCGCAGTTAATGCATCACTGGTTGGCAACTGCCTCCAAGATGTATCAAATCAGAGGACAACAGAAGAATGCGACTCATTCTATTCCCTGAGGGGGCTCTCTTTTCATAATTTTGGGCAAGCAAACGTGACCAGGCCTCGTGCAGCAGAAAGCTCTGGGAAGAACAATAGAAGAAAAATTATACTAGCAGGAATTTTGAGTGGAGTTGGTTTGATTGCAGTTTTGGTGTTCCTGCTGGCGTTGTTGCTTCTGAGTACTCATAAGCGGAGTAAATCAAATAATCCAGGAACTGGTGTGGGTGTGGGTGCGGCTCTTGCTAGTGGCAGTCCTGCCCCTGCCGATGCATTGATAGAACTATCAGAAGTAGGACACTCATTTTCATACCAGCAATTGCTGAAGGCTACAGGTGATTTCAGCGATGCAAATCTTATGAAACACGGTCACACGGGTGATCTCTTCAATGGTGTTTTAGAAAGTGGGATATCTGTAGTGATCAAAAGGATTGATTTGCATTCAACTAAAAATGAGAATTCTTACATTTCAGAATTGGACCTTTTCAGTAAAGTTTCTCATACTAGATTGGTTCCCTTGTCGGGTTATTGCTTAGAAAATGACAATGCGAAGTTCCTGGTTTATAAACATATGCCAAACGGGGACTTGTTGAATTGCTTGCACAACCGACAAACAATATATGAAGATGGTACATTACAGTCTTTGGATTGGATAACAAGATTGAAAATTTCTATTGGAACTGCAGAGGCCTTATGTTATCTGCATCATGAATGCAATCCACCCTTTGTTCACAGAGATATTCAAGCAAGCAGTATACTTCTAGATGATAAATATGAAGTTCGGCTAGGGAGTCTAAATGAAGTCTGCACCCAGGAAGGGGATACTCATCAAAGGAGAATCTCAAGGTTGCTACGGTTGCCCCAGTCATCTGATCGAGGCTCATCTGGTTCATCACCAGCAGTTTGTGCCTATGACGTATATTGCTTTGGGAAAGTATTGCTTGAGATGATAACTGGAAAACTGGGCATTGGTGCATCTGGTGATGCAGAAGTAAGAGAATGGTTGGAACAGACATTACCTTACGTTAGTGTATATGACAAGGATCTTGTAACTAAGATTGTGGATCCATCCATGGTTGTTGACGAGGATTTCTTAGAGGAAGTGTGGGCTGTGGCGATCATAGCTAGGTCTTGCCTGAATCCTAAACCTTCAAGAAGACCCCAGATGAGATATGTCCTCAAGGCTCTTGAAAATCCTCTAAAAGTCATGAGGGAGGAGAGTTACAGTAGTTCTGCAAGGCTAAGGACAACTTCTTCCAGAGGCTCTTGGAATGCTGCTTTATTTGCTAGTTGGCGTCAGAATTCTGATGTAACAGTGGTTCCGGCAGCTTCTTCTGGTGCATTAAGAGCTGAAGAAGGCGGCGGTGAGCTTTCTTGGTCCCGCCGACGTTATTTGACTGAGATAGTTCCAGAACCATCTAGCATCATTCAAGAGGCAGAGAAGAACTAG 2673 0.4317 MVDHQRNLVSLGFMFLLLFQFTFEQLEPLSSPTERLALLQLRSSLGLRCREWPIKADPCLIWNGVSCENGRVTGINISGFRRTRLGRQNPQFSVDALANLTFLQSFNASKFLLPGPIPHWFGQELSSLKVLDLRSCSITGAIPSTLGNLISLTTLYLSDNNLTGIIPDSLSQLSAISVLDLSRNSLSGSLPASFVSLGNLSFLDISSNYLSGSIPQRIGSLSKLQYLNLSNNGLTSSIPAQLGDLSNLVDLDLSDNSLYGLVPPDLMGLRSLQRMKLGNNILEGPLPENSFHTTSRLQFIELRKNNFTGTLSDELWYLPRLSFVDVSSNYFTGVLPSSSSTANATTTIKGNISHNLFYGSLTPLLKRFSFIDLSSNYFEGKVLDFAVNASLVGNCLQDVSNQRTTEECDSFYSLRGLSFHNFGQANVTRPRAAESSGKNNRRKIILAGILSGVGLIAVLVFLLALLLLSTHKRSKSNNPGTGVGVGAALASGSPAPADALIELSEVGHSFSYQQLLKATGDFSDANLMKHGHTGDLFNGVLESGISVVIKRIDLHSTKNENSYISELDLFSKVSHTRLVPLSGYCLENDNAKFLVYKHMPNGDLLNCLHNRQTIYEDGTLQSLDWITRLKISIGTAEALCYLHHECNPPFVHRDIQASSILLDDKYEVRLGSLNEVCTQEGDTHQRRISRLLRLPQSSDRGSSGSSPAVCAYDVYCFGKVLLEMITGKLGIGASGDAEVREWLEQTLPYVSVYDKDLVTKIVDPSMVVDEDFLEEVWAVAIIARSCLNPKPSRRPQMRYVLKALENPLKVMREESYSSSARLRTTSSRGSWNAALFASWRQNSDVTVVPAASSGALRAEEGGGELSWSRRRYLTEIVPEPSSIIQEAEKN 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2257 890 Gene3D Transferase(Phosphotransferase) domain 1 599 826 - -
Acco03g2257 890 Gene3D Phosphorylase Kinase; domain 1 495 598 - -
Acco03g2257 890 Pfam Leucine rich repeat 223 280 IPR001611 GO:0005515
Acco03g2257 890 Pfam Leucine rich repeat 151 210 IPR001611 GO:0005515
Acco03g2257 890 FunFam Predicted protein 492 598 - -
Acco03g2257 890 ProSiteProfiles Protein kinase domain profile. 522 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2257 890 Pfam Leucine Rich Repeat 127 149 IPR001611 GO:0005515
Acco03g2257 890 FunFam Putative LRR receptor-like serine/threonine-protein kinase 599 825 - -
Acco03g2257 890 Gene3D Ribonuclease Inhibitor 189 290 IPR032675 -
Acco03g2257 890 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 31 190 - -
Acco03g2257 890 Gene3D Ribonuclease Inhibitor 291 401 IPR032675 -
Acco03g2257 890 Gene3D Ribonuclease Inhibitor 31 188 IPR032675 -
Acco03g2257 890 Pfam Protein tyrosine and serine/threonine kinase 529 803 IPR001245 GO:0004672|GO:0006468
Acco03g2257 890 ProSiteProfiles Leucine-rich repeat profile. 151 172 IPR001611 GO:0005515
Acco03g2257 890 SUPERFAMILY Protein kinase-like (PK-like) 504 804 IPR011009 -
Acco03g2257 890 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 114 803 - -
Acco03g2257 890 FunFam Leucine-rich repeat receptor protein kinase EMS1 191 289 - -
Acco03g2257 890 SUPERFAMILY L domain-like 62 360 - -
Acco03g2257 890 SMART LRR_typ_2 125 148 IPR003591 -
Acco03g2257 890 SMART LRR_typ_2 173 196 IPR003591 -
Acco03g2257 890 SMART LRR_typ_2 221 245 IPR003591 -
Acco03g2257 890 SMART LRR_typ_2 149 172 IPR003591 -
Acco03g2257 890 SMART LRR_typ_2 269 293 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2257 Acco-ChrAcco03 48424905 48428431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2257 33 696 Miscellaneous Gene Families AT2G16250 55.240 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Acco03g2257 PK_Tyr_Ser-Thr 2.3e-20 CL0016