Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2244 ATGGCTTCAAGTTCCGATTCCTCTCCTTCGCCTGAATCATCTCCGTCGGATTCTGCTCCACCACCGCCACCGGATTCAAGTTCACCTGGCGATTCCTTTTCCCCTCCCCCACCACAATCCCCTCCGCCCCCACCACAGTCTCCTCCTTCGCCTCCACCACCACCATCTAACAGCCAATCTCCCCCACCGCCATCAGACCAAGACAATGGTGGAGACAACAGTAACTCCTCCCCTCCGCCTCCTCCGCCTCCTAATAGCAATAATGGTGGAAATAATAACAAAGGGAGCCCTCCGCCTCCACCACCGCCGTCAAATTCCAAAGGAAATTTTTCGCCTCCGCCGCCAGTGCACCGGTTGTCTCCACCAGAAAAAAGTTCACATGGATCATCGAATAGTACATCACCGCCATCAGGTAGCAACGGCGATGGATCTCAATTGAGCTTACCGGCTATTATTGGTTTGGCTGCAGGAGCTGGCTTGTTGCTGCTTGTGTTCATCTGCGTCTTCGTTGTATGCAGCAGAAGGAGGAAGAGATCTGAGGGTCCCATTATTTACTACACCAACAAAAAATTTGATGATGACTATTACACGCACTCAAAGAAGGGAAACAATTGGAACAATGGTGATCAACATGTCACGAATATTCCAGCACCACCAGGAGCTTGGGGCGCACCGCCAGCTCCATTCTCTGGAAACATGAACAGCGGTGAGATGAGCAGTGCAAGCTATTCAGGGCCGGCGGGAGCACCTCTGCCTCCGCCACACCCTTTGGTGGCGATAGGGTTCAACAAGAGCACTTTCACGTTGGAAGAGCTAACAGCTGCAACAAATGGATTCGCCGAAGCAAACCTACTGGGACAAGGTGGGTTCGGGTATGTGCATAAAGGGGTGCTGCCCAATGGGAAGGAAATAGCCGTGAAGAGTCTCAAGTCCACCAGCGGCCAAGGCGACAAAGAGTTTCAAGCAGAGGTCGATATCATTAGCCGAGTTCATCATCGTCATCTCGTTTCTCTGGTTGGCTATTGTATTCAAGATGGTCGTAGTCTTTTGGTCTATGAGTTTGTACCCAACAAAACTATGGAATACCATCTTCACGGAAAGGACCGACCCGTTATGGATTGGCCTACTAGGCTCAAAATTGCAATTGGATCGGCCAAGGGACTTGCTTATTTGCACGAGGATTGCCACCCTCGAATCATCCACCGCGACATAAAGGGCGCAAACATTCTACTCGAAAACAACTTTGAAGCTAAGGTGGCAGATTTTGGATTGGCAAAGCTTACTCAAGACAACAACACCCATGTTTCCACCCGTGTAATGGGAACATTTGGGTATTTGGCTCCTGAGTATGCTTCGAGTGGGAAATTAACTGAGAAGTCTGATGTGTTCTCATTCGGTATTATGCTTCTGGAGCTCATAACAGGACGACGTCCCGTTGACTCCACTGGAGATTATGAAGAGGACAGTTTAGTTGACTGGGCGAGAGGTCTTTGCACGAAGGCGATGGAAAGTGCAAGCTTTGAAGGTCTGGCGGATCCACGACTAGGCAATAATTATGATATGCAGGAGATGGCCCGTATGGTGGCTTGTGCCGCTGCCAGCGTCAGGCACTCTGCAAGAAGGCGACCAAAAATGAGCCAAATAGTAAGGGCACTGGAGGGAGACGTGTCACTAGATGATCTGAGCGAGGGAGTGAAACCAGGGCAGAGTTCAATATTCACAAGCAATGGTATGGATTATGACGCAGGCAGTTACAGTGCAGACATGAAGAAGTTCAGGAAGCTTGCATTAGATAGCAGCTATGCAAGCAGTGAGTTTGGCCAAACCAGTGAGTATGGTCTCAACCCTTCCTCTTCAAGCAGCGACACTCACTCTTCTGAATACAAAACCAACCATCTGCAACATGCCACCCCCTAA 1917 0.4997 MASSSDSSPSPESSPSDSAPPPPPDSSSPGDSFSPPPPQSPPPPPQSPPSPPPPPSNSQSPPPPSDQDNGGDNSNSSPPPPPPPNSNNGGNNNKGSPPPPPPPSNSKGNFSPPPPVHRLSPPEKSSHGSSNSTSPPSGSNGDGSQLSLPAIIGLAAGAGLLLLVFICVFVVCSRRRKRSEGPIIYYTNKKFDDDYYTHSKKGNNWNNGDQHVTNIPAPPGAWGAPPAPFSGNMNSGEMSSASYSGPAGAPLPPPHPLVAIGFNKSTFTLEELTAATNGFAEANLLGQGGFGYVHKGVLPNGKEIAVKSLKSTSGQGDKEFQAEVDIISRVHHRHLVSLVGYCIQDGRSLLVYEFVPNKTMEYHLHGKDRPVMDWPTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKLTQDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGIMLLELITGRRPVDSTGDYEEDSLVDWARGLCTKAMESASFEGLADPRLGNNYDMQEMARMVACAAASVRHSARRRPKMSQIVRALEGDVSLDDLSEGVKPGQSSIFTSNGMDYDAGSYSADMKKFRKLALDSSYASSEFGQTSEYGLNPSSSSSDTHSSEYKTNHLQHATP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2244 638 SMART serkin_6 279 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2244 638 Gene3D Phosphorylase Kinase; domain 1 256 354 - -
Acco03g2244 638 Pfam Protein tyrosine and serine/threonine kinase 283 550 IPR001245 GO:0004672|GO:0006468
Acco03g2244 638 SUPERFAMILY Protein kinase-like (PK-like) 257 552 IPR011009 -
Acco03g2244 638 MobiDBLite consensus disorder prediction 123 142 - -
Acco03g2244 638 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Acco03g2244 638 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 157 603 IPR047117 -
Acco03g2244 638 Gene3D Transferase(Phosphotransferase) domain 1 355 563 - -
Acco03g2244 638 MobiDBLite consensus disorder prediction 605 638 - -
Acco03g2244 638 FunFam Proline-rich receptor-like protein kinase PERK1 355 563 - -
Acco03g2244 638 MobiDBLite consensus disorder prediction 14 62 - -
Acco03g2244 638 FunFam proline-rich receptor-like protein kinase PERK1 257 354 - -
Acco03g2244 638 MobiDBLite consensus disorder prediction 1 142 - -
Acco03g2244 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Acco03g2244 638 ProSiteProfiles Protein kinase domain profile. 279 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2244 638 MobiDBLite consensus disorder prediction 94 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2244 Acco-ChrAcco03 48326525 48330849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2244 119 634 Trihelix Transcription Factor Family AT1G70460 49.136 5.41e-158 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco03g2244 PK_Tyr_Ser-Thr 8.1e-46 CL0016