LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco03g2228	ATGCTTGCCGATGCCACTCTTACAGATGGATCCAACCAGACTGATGTGCGAACTAGCGTTGAGGCTGATTCCAGAAAGACCCAAGATTCCCGCGCACCTGTCTCACCTAGTTTTGTGCATCATGACGTGAAACGTGAAGTTCAAGAGCTCCAGGAGCCCCAGTTGCCACGGTCGATTGTTCTTGCATTGCCGGCGTTTGTGCCTCTGGACGAAGATCAAAGAAGAAGACAATTAAACAGGGAAGCTGCTCGAAGATTTAGAATACGCAAGCAGCAAGAGCTTGAAGAACTACAAATTAGGATGGACAATCTTATCCGCAAAACTTCCGCTATGGTAAAAAATCTACGGAATCTTGCCAAGGATTGCATGGAGCTGGCTCGTTCAAATAACGCTATTGAGAAAGAGATCATCGAGAAGTTTGGACCAGACGCCATTGCCGATCTTTTGCCCTTCAAGCCAGCTAGAGATGATGATGAAAGCCATAGTCAGGGAAGCGACTCATCACAATCATCAACTGACTTTACCGGCCAGTCTTGA	537	0.4711	MLADATLTDGSNQTDVRTSVEADSRKTQDSRAPVSPSFVHHDVKREVQELQEPQLPRSIVLALPAFVPLDEDQRRRQLNREAARRFRIRKQQELEELQIRMDNLIRKTSAMVKNLRNLAKDCMELARSNNAIEKEIIEKFGPDAIADLLPFKPARDDDESHSQGSDSSQSSTDFTGQS	178

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco03g2228	178	SMART	brlzneu	67	131	IPR004827	GO:0003700\|GO:0006355
	Acco03g2228	178	MobiDBLite	consensus disorder prediction	148	178	-	-
	Acco03g2228	178	MobiDBLite	consensus disorder prediction	164	178	-	-
	Acco03g2228	178	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	69	132	IPR004827	GO:0003700\|GO:0006355
	Acco03g2228	178	MobiDBLite	consensus disorder prediction	1	38	-	-
	Acco03g2228	178	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	73	170	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Acco03g2228	178	Pfam	bZIP transcription factor	73	127	IPR004827	GO:0003700\|GO:0006355
	Acco03g2228	178	MobiDBLite	consensus disorder prediction	1	18	-	-
	Acco03g2228	178	CDD	bZIP_plant_GBF1	73	123	IPR045314	GO:0003700\|GO:0006355
	Acco03g2228	178	SUPERFAMILY	Leucine zipper domain	72	125	IPR046347	GO:0003700\|GO:0006355
	Acco03g2228	178	Coils	Coil	87	135	-	-
	Acco03g2228	178	Gene3D	-	69	133	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco03g2228	Acco-ChrAcco03	48185344	48188842	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco03g2228	65	148	bZIP Transcription Factor Family	AT4G36730	38.202	2.38e-13	65.1

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Acco03g2228		bZIP_1	1.1e-09	CL0018