Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2173 ATGGGTTCGCTTCCTCCTCCACAACTGAGCTTGGATTTGAGACCTACTTTTGTTCCCAAGACGATCACTGATTTCCTCTACGAAGTTTCCACTATCGCCAATTCGTCCGATAAGCTCTCCAGGCTTGACGATTTCCTCAAGAGATTGGAAGAGGAAATGAGGAAGATCGATGCCTTTAGGCGTGAGCTTCCTCTCTGTATGCTCCTCTTAAACGATGCAATTTTAGTTCTGAACGAGGAATCGGCAAAATTCAGGATACCTGATTCTCAGCCAGTATTGGAAGAATTTATTCCCTTGAGGAAAGAATGTGATCAGAAGGAGGAAAATGAAACAGAAGAGGAATGCCGGGATAAGAAGAATTGGATGAGTTCTGTACAACTGTGGAACACTGATAATTATACCACCTGTGAACAAAAAGAGCATTATAAATTAGAAAACAAGAAAAACGAAGAACAGTCTGTGGCAGAGGATCCTTTCAAATCTTGTAGAAGTCGAATTGGAAGGAGGGTTTTTATGCCTTTTCCAACATACTGTCCAGTTTCTGTGACAACTGTGGCTACCAAGGAAGAAAAGGAGGAGTCTGATGTTAATGGACTTTCTCTTGTGACTCCGGGAGTTAAAAATCTGAAGGAGGGCTCTGTTTCTAGCGGATCAAGAATATCATCTGGCAGGGCGGTTTCATCCCCTCCTTGCAGTGACCAACCAAGTTTACGCCCTGGACAGCATCAGACTGCTCGGAAACAAAGAAGGTGTTGGTCACCAGAGCTGCATCGTCGATTTGTCAATGCCCTGCAGCAACTTGGAGGTTCTCAAGCTGCCACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACCAATGACGAAGTGAAAAGCCATTTACAAAAATACCGACTTCATACCCGAAGACTTCCAGCTTCCGCAGCTACACCTGGTAACCAGTCCGTTGTAGTTCTTGGGGGTTTATGGATGTCCCAAGATCAGTATAATGACTCATCCAAGGGAAGCGTTTCAGGGTCTGGCTCTCCTCAAGGTCCCCTCCAGTTAACTTCAGGGTCTGGAGGAGTAATGTCCCAAACTGAAGATGACAGCTTGGAAGATGATGAGGATGATGAAAAATCCAGAGAGCGATAG 1140 0.45 MGSLPPPQLSLDLRPTFVPKTITDFLYEVSTIANSSDKLSRLDDFLKRLEEEMRKIDAFRRELPLCMLLLNDAILVLNEESAKFRIPDSQPVLEEFIPLRKECDQKEENETEEECRDKKNWMSSVQLWNTDNYTTCEQKEHYKLENKKNEEQSVAEDPFKSCRSRIGRRVFMPFPTYCPVSVTTVATKEEKEESDVNGLSLVTPGVKNLKEGSVSSGSRISSGRAVSSPPCSDQPSLRPGQHQTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRLPASAATPGNQSVVVLGGLWMSQDQYNDSSKGSVSGSGSPQGPLQLTSGSGGVMSQTEDDSLEDDEDDEKSRER 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2173 379 SUPERFAMILY Homeodomain-like 244 305 IPR009057 -
Acco03g2173 379 MobiDBLite consensus disorder prediction 207 250 - -
Acco03g2173 379 MobiDBLite consensus disorder prediction 331 362 - -
Acco03g2173 379 MobiDBLite consensus disorder prediction 209 242 - -
Acco03g2173 379 MobiDBLite consensus disorder prediction 331 379 - -
Acco03g2173 379 Gene3D - 246 304 - -
Acco03g2173 379 NCBIfam myb-like DNA-binding domain, SHAQKYF class 247 302 IPR006447 GO:0003677
Acco03g2173 379 Coils Coil 32 62 - -
Acco03g2173 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 304 IPR017930 -
Acco03g2173 379 FunFam Myb family transcription factor 246 304 - -
Acco03g2173 379 Pfam Myb-like DNA-binding domain 249 300 IPR001005 -
Acco03g2173 379 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 376 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2173 Acco-ChrAcco03 47693946 47696077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2173 8 326 G2-like Transcription Factor Family AT2G03500 39.645 1.93e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco03g2173 Myb_DNA-binding 6e-07 CL0123