Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2167 ATGGGGGTTTGTACGTCCAAGCCGCAGAAGCCGAACCATTTTCCCGTTCAGGAACTAGAAGGCGACGATGGCTCCTGCGATCCTTCAAGCATCCCGAAAGGCTCTCCTACTCCGAAGGATGAGATCGTTTCCGCAAAGCAGTCTCCGTTCTTTCCATTCTACAGCCCCAGCCCAGCCCGCTTCTTTAAGAAATCTCCGGCGCCGACGGGAGGGCCCCGGAGTGCAAGTTCGACGCCGGGGAGAATTTTCCGGCGTCCCTTCCCTCCGCCGTCGCCGGCGAAACACATAAAGGCTTTCCTTGCGAAGAGACAAGGGAAAAAGACTTCGACAGCGATACCGGAAGATGGAGAGGAGGTGGATTTGGACAAGAGGTTTGGGTTTTCGAAAGAGTTCACGAGTAGGCTTGAGGTTGGGGAAGAAGTGGGCAGAGGGCATTTTGGGTATACTTGTTCTGCTAGGTTTAAGAAGGGCGAGCATAAGGGCAAGCAAGTTGCGGTGAAGGTCATCCCTAAAGCTAAGATGACAACCGCAATTGCAATTGAAGATGTACGAAGGGAAGTTAAAATATTGCGAGCATTGACTGGACACAACAATCTGATACAATTCTATGATGCATTTGAAGACCAGGATAATGTCTATATTGTTATGGAGTTATGTGAAGGAGGGGAGCTTTTAGATAGGATATTGTCAAGAGGAGGGAAATACTCAGAAGAAGATGCTAAGGTTGTCATGGTTCAGATACTAAACGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGAGATCTAAAGCCAGAGAATTTCTTGTATGCTTCAAAGGATGAGAATTCTGAGTTGAAGGCAATAGACTTCGGGTTATCAGACTTTGTCAAACCAGATGAAAGGCTCAATGACATTGTTGGAAGTGCATACTATGTGGCACCCGAAGTTCTACATAGGTCTTATAGTATAGAAGCTGATATATGGAGCATAGGTGTAATAGCATATATTCTTTTATGTGGTAGTCGCCCCTTTTGGGCTCGAACAGAGTCTGGTATTTTTCGGGCAGTTTTGAAAGCAGATCCAAGCTTTGATGAAGCTCCCTGGCCCTCTTTATCTTTGGAAGCAAAAGATTTTGTCAAGCGTCTATTAAATAAGGACCCACGGAAGCGACTTTCAGCTGCTCAGGCCTTAAGTCACCCTTGGATACGAAATTACAATAACGTAAAAGTTCCTCTTGATATTCTAATATTCAGGCTCATGAAGGCTTATATGCGATCATCATCCTTGCGGAAGGCTGCGTTAAGGGCCTTATCCAAGACATTGACTGCAGATGAACTTTATTATCTGAGGGAGCAGTTTACTTTGTTGGGGCCAAGCAAAAGTGGCAGTATAACCTTGGATAACGTTAGGACGGCCCTGATGAAACATGCCACAGATGCCATGAGGGAGTCTCGTATCCCTGATCTTCTTGCCTCGCTAAATGCATTACAATATAGAAGAATGGATTTTGAAGAATTTTGTGCCGCTGCGTTAAGTGTGCATCAGCTTGAAGCTCTAGATCGATGGGAGCAACATTCACGCTGTGCTTATGAACTTTTTGAGAAAGACGGAAACAGGGCTATAATCATTGAAGAACTTGCCTCAGAACTAGGACTGGGTCCTTCTATTCCAGTTCATGTCGTACTACAAGACTGGATAAGGCACACTGATGGGAAGCTAAGCTTTCTTGGGTTCGTCAAATTGTTACATGGCGTATCAAGCCGAAGTCTTGCAAAAGTTCAATAA 1770 0.4548 MGVCTSKPQKPNHFPVQELEGDDGSCDPSSIPKGSPTPKDEIVSAKQSPFFPFYSPSPARFFKKSPAPTGGPRSASSTPGRIFRRPFPPPSPAKHIKAFLAKRQGKKTSTAIPEDGEEVDLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARFKKGEHKGKQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHNNLIQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEEDAKVVMVQILNVVAFCHLQGVVHRDLKPENFLYASKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSIEADIWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSLEAKDFVKRLLNKDPRKRLSAAQALSHPWIRNYNNVKVPLDILIFRLMKAYMRSSSLRKAALRALSKTLTADELYYLREQFTLLGPSKSGSITLDNVRTALMKHATDAMRESRIPDLLASLNALQYRRMDFEEFCAAALSVHQLEALDRWEQHSRCAYELFEKDGNRAIIIEELASELGLGPSIPVHVVLQDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2167 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Acco03g2167 589 ProSiteProfiles Protein kinase domain profile. 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2167 589 ProSitePatterns Protein kinases ATP-binding region signature. 141 167 IPR017441 GO:0005524
Acco03g2167 589 CDD STKc_CAMK 136 396 - -
Acco03g2167 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 122 564 - -
Acco03g2167 589 FunFam CDPK-related kinase 1 128 223 - -
Acco03g2167 589 MobiDBLite consensus disorder prediction 61 94 - -
Acco03g2167 589 Gene3D - 417 506 - -
Acco03g2167 589 FunFam CDPK-related kinase 1 433 506 - -
Acco03g2167 589 Gene3D Phosphorylase Kinase; domain 1 137 224 - -
Acco03g2167 589 SMART serkin_6 135 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2167 589 Gene3D - 422 576 - -
Acco03g2167 589 Pfam Protein kinase domain 136 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2167 589 MobiDBLite consensus disorder prediction 1 42 - -
Acco03g2167 589 Gene3D Transferase(Phosphotransferase) domain 1 225 416 - -
Acco03g2167 589 FunFam CDPK-related kinase 3 127 299 - -
Acco03g2167 589 FunFam Calcium-dependent protein kinase SK5 307 402 - -
Acco03g2167 589 SUPERFAMILY EF-hand 425 579 IPR011992 -
Acco03g2167 589 SUPERFAMILY Protein kinase-like (PK-like) 131 446 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2167 Acco-ChrAcco03 47647516 47653990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2167 1 585 EF-hand Containing Proteins AT3G50530 70.644 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco03g2167 Pkinase 4.4e-71 CL0016