Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2160 ATGCAGAAACAGAAATCAGCGTGTCGACCTACCAGGATCATGAGGACTCCATCTTCTTTAGAGGGACAAGTTACTGATAATGCAGAAACAGAAATCAGCGTGTCGACCTACCAGGATCATGAGGATTCAGACGCATACGTTGAATCTAGACGATACAGATACCTTTTCCCCCCTCGACATTGGCTCATGCACCCAGATTCATATTGCAAATACATGGAAAGATACGTGTTCACACCACTTGAATTTGAAACTGAAGCTGATTCTGCAACTAGCATCCCAGATCTGGTTTTGATTGGAGAACAGATAGAGTACTATTTTAGCCATGATAATTTGACTCAAGATGTAAGGTTCCGAGAACAAATGATCCATCATGGAGGATGGGTTCCCCTTCCATTTATAGCCAGCCTTCCTCAGGTGAGAGAATTGACACTTAATGCTAAAGTGATAGAGGAAGCTGTTGCAATTTCATTTATGCTGGAAGTTATGGAGGGATTGAGATCTGCTGTGACAGCAAATGAATTAGAGCAGTCTGGTTTCTCAAATATGGCATGCATTACGTCAGGGAAGATGACCGTATTGGTCTTTGCAATGGCTTCAAAGAGTTCCACTGAGATCGGAATTTTGGATACAAAGGCCATCAACGAGACTTGCCCACAACCCGACATTAAACAGTGGGAAATGCCTTACGCGCATTGCCCAGAACTCACTGCAGGTTATTTAGAATTTTGTTTAAATCTTAGTGACATTTCTTTCTTTTTGCCTCATCTTAGGGATGAATGTGCTTTTGCAATCCTGTGA 798 0.4223 MQKQKSACRPTRIMRTPSSLEGQVTDNAETEISVSTYQDHEDSDAYVESRRYRYLFPPRHWLMHPDSYCKYMERYVFTPLEFETEADSATSIPDLVLIGEQIEYYFSHDNLTQDVRFREQMIHHGGWVPLPFIASLPQVRELTLNAKVIEEAVAISFMLEVMEGLRSAVTANELEQSGFSNMACITSGKMTVLVFAMASKSSTEIGILDTKAINETCPQPDIKQWEMPYAHCPELTAGYLEFCLNLSDISFFLPHLRDECAFAIL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2160 265 SMART la 91 172 IPR006630 -
Acco03g2160 265 Gene3D - 94 173 IPR036388 -
Acco03g2160 265 PANTHER LUPUS LA PROTEIN-RELATED 96 161 IPR045180 -
Acco03g2160 265 SUPERFAMILY "Winged helix" DNA-binding domain 96 164 IPR036390 -
Acco03g2160 265 ProSiteProfiles La-type HTH domain profile. 88 178 IPR006630 -
Acco03g2160 265 Pfam La domain 100 153 IPR006630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2160 Acco-ChrAcco03 47582370 47587692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2160 119 205 Sulfurtransferasese or Rhodanese AT2G42220 33.333 4.57e-06 44.7