Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2155 ATGAAGCCGACAACTTCAGCCACTCCTTCCAAGGTTAAGAGAAGTAGAGTACAACATAAGGTAGCAACTAAGAACACAGCAGAAAGATCTCAGAGATCAAAGGAATCAAGAGTCGATCCTCAAATTCTTGCTCTGACTCTTGCACGAGCAAATCACATAAAATCAAAATTATCAAATCAGCTTCCAAGCTTAGTAAAGCCAATGGTGCCGTCAAATGTGAACGGAGGATTTTGGATGGGTCTTACTAAACGTTTCTGTGAGGTGAATATGCCCAAGGTTGATACTATGATTGTTTTGGAAGATGAGAATGGGAACGAATGGGAAGTAAAATATCTTGCTCGTAAAGTGGGCTTAAGTGGTGGGTGGAAACAATTTTCCAACGATCACAAATTACGTGAGGGGGATGTTTTAGTTTTCCAATTAATCCAACCTTCCAAATTTAAGGTGTACATCGTAAAATATCTTGGATCAAACAAAGTGGATGTTGCTCCTAGCTCTGTACAATGTTCCTTGAATCAACAGAATACAAATGTTCCTCAAAATAATGATCCAAACAGCAACAAAATGATATGTGATGCTAACATCATAGCACCGTCGTCAGAACGACATGAAAACACAAGTGATCTAGAAGAAAATTTGTGCCTACAAGTTTCGAACGAGAATACACTGACGAGATATGCGACCACTTTCCAAGAAGTTTCAAGTGTTGAGAATTTCAGTATTATGGTTGATGGCTTGGTACTTGACCCACAACTACCCCAACACCTGAAAATCAAGTACTATGAGTTATGCTGCAGCCAAAACATGTTTCTCCATGAATATCTTCTGGGAGGTCAAAACTGTCAACTGGTCGTTGGAATTATACGTGAGATCGTTACTATTGCTGATGATATTAAAGCGAGCAAGATCACGACCCCTTCAGATAGTTTTGTCCTGTGGTTTAGAAAGTTGAAATGCCTTGAAATGTGGGGCATGAATGTTAGTTTCTTACTTGCTAGGATAGAACAACTCATGAGAATAGCTTCAAAAAATGAGGAGTACAGAGAGGCTATGAATCATCGAGAACAAGCTGAAGAGGAGAAGAAAGATCTCGAACGAAAGCTTGAAGAAGTGAAAGAGACCATTACAAGACTCGATGATCAAATTGACTCCCCAAATCTGAATCTTCAGACATTGGAGGCCAAGTTTCAAGGATTAGCCACTGCTCCTTGGTGA 1215 0.3975 MKPTTSATPSKVKRSRVQHKVATKNTAERSQRSKESRVDPQILALTLARANHIKSKLSNQLPSLVKPMVPSNVNGGFWMGLTKRFCEVNMPKVDTMIVLEDENGNEWEVKYLARKVGLSGGWKQFSNDHKLREGDVLVFQLIQPSKFKVYIVKYLGSNKVDVAPSSVQCSLNQQNTNVPQNNDPNSNKMICDANIIAPSSERHENTSDLEENLCLQVSNENTLTRYATTFQEVSSVENFSIMVDGLVLDPQLPQHLKIKYYELCCSQNMFLHEYLLGGQNCQLVVGIIREIVTIADDIKASKITTPSDSFVLWFRKLKCLEMWGMNVSFLLARIEQLMRIASKNEEYREAMNHREQAEEEKKDLERKLEEVKETITRLDDQIDSPNLNLQTLEAKFQGLATAPW 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2155 404 MobiDBLite consensus disorder prediction 21 36 - -
Acco03g2155 404 SUPERFAMILY DNA-binding pseudobarrel domain 59 152 IPR015300 -
Acco03g2155 404 MobiDBLite consensus disorder prediction 1 38 - -
Acco03g2155 404 ProSiteProfiles B3 DNA-binding domain profile. 64 155 IPR003340 GO:0003677
Acco03g2155 404 Gene3D - 45 155 IPR015300 -
Acco03g2155 404 CDD B3_DNA 62 153 IPR003340 GO:0003677
Acco03g2155 404 Coils Coil 340 381 - -
Acco03g2155 404 Pfam B3 DNA binding domain 65 151 IPR003340 GO:0003677
Acco03g2155 404 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 13 153 IPR044837 -
Acco03g2155 404 SMART B3_2 64 155 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2155 Acco-ChrAcco03 47555542 47558791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2155 46 153 B3 DNA Binding Superfamily AT3G19184 48.148 6.15e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco03g2155 B3 2.7e-18 CL0405