Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2149 ATGTCCTCCGAACCACCACCTTCCTCCTCCTCTTTTCACCCGCCCTCCGCCCTCTCCCGTGACCAAGAACTCTCTGTCATCGTCGCTGCACTCACCAACGTCGTCATTGGCTCCACATCCGACAATCTCCCTTACCACCTTAACTCGCCCTACTCCTCTGCCGCCAGCAACGTAGTCCACAATGACAACTACGCGGGGCCATCCCTGACTGTTGAAGCCTCCCGCCCTGATTTCGGATTCGCCTCCAGCTCTGGCCACATGTTTTTACCCGAAGAGATGGCGAAAAATGTCGGGAACAGACAGCCGCAGAAGAGGGCGAAGAAGAAGTACAGGGGAGTGAGGCAGAGGCCATGGGGGAAATGGGCGGCGGAGATTCGAGACCCGAGACGGGCGACCCGGGTCTGGCTGGGAACCTTCAAGACGGAGGAGGAAGCAGCTCGCGCGTACGATAAAGCGGCCATAGAGTTCCGTGGGCCCCGCGCTAAGTTGAATTTTCCTTTCTCTGATAACTCGTTGCTGAATTTGCAGGCCACTCAGCTGCCGGAAGCTCCTTCAACTTCGGCAGTGGCGTCGGTGGCTGAACAGGGGAATACCGGGAATCTGAACAGCGGAATGGAAGCGGTGGGGAATGATGAAGCCGGTGAATTCTGGGATAGGATTGAAAAAGCAGATTTGGAACAGTGGTTGATGGATTTTCCGTCAGGAGACTGTTCTGACTCTGCTCCCGGAAGTTCTCAGAGTTGGTGA 747 0.5622 MSSEPPPSSSSFHPPSALSRDQELSVIVAALTNVVIGSTSDNLPYHLNSPYSSAASNVVHNDNYAGPSLTVEASRPDFGFASSSGHMFLPEEMAKNVGNRQPQKRAKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFKTEEEAARAYDKAAIEFRGPRAKLNFPFSDNSLLNLQATQLPEAPSTSAVASVAEQGNTGNLNSGMEAVGNDEAGEFWDRIEKADLEQWLMDFPSGDCSDSAPGSSQSW 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2149 248 CDD AP2 108 166 IPR001471 GO:0003700|GO:0006355
Acco03g2149 248 SMART rav1_2 109 172 IPR001471 GO:0003700|GO:0006355
Acco03g2149 248 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
Acco03g2149 248 Gene3D AP2/ERF domain 108 167 IPR036955 GO:0003700|GO:0006355
Acco03g2149 248 FunFam Ethylene-responsive transcription factor 2 108 167 - -
Acco03g2149 248 SUPERFAMILY DNA-binding domain 109 168 IPR016177 GO:0003677
Acco03g2149 248 ProSiteProfiles AP2/ERF domain profile. 109 166 IPR001471 GO:0003700|GO:0006355
Acco03g2149 248 PANTHER DNA-BINDING DOMAIN 84 188 IPR044808 GO:0003700|GO:0009873
Acco03g2149 248 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Acco03g2149 248 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2149 Acco-ChrAcco03 47516161 47516907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2149 107 187 AP2-EREBP Transcription Factor Family AT2G33710 66.667 1.38e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco03g2149 AP2 1.4e-15 CL0081