Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco03g2139 | ATGAGATCAAACATGAACTTCAAGGGCTACGAGGATGCTACTAACAATAATGGAAGCAACAAGCCAGCACCTGCAAATCATCCCACTCTCATGAGTCAATCTTCAATATACTCGCTCACTTTTGAAGAGTTTCAGAGCACAATAGGTGGCCTTGGAAAGGACTTTGGCTCAATGAACATGGATGAACTCTTGAAGAACATTTGGACAGCCGAAGAGACTCAGTCACTGGCCATGTCATCTTCAAATAATAATGGAGGAGAAGCCAGTAAGAACAACACCACCATGATCAGCAGCAGCAACTACAACAGCAACAGCAATTATTATTACAGTAACCCGAATGGGAATTTGCAGAGACAAGGGTCACTTACTTTGCCCAGGACACTTAGTCAAAAAACTGTTGATGAAGTTTGGAGGGACTTGATGAAAGAAAGTGGTGGTGGTGATAGTGGTGGGGCTAACACTAGTACGAAAGATATTAGTGGTGGGGCTGTAGCTTATGCTTCTGCTATGCCTCAGAGGCAACAAACTTTAGGTGAAATGACATTAGAGGAATTCCTGGTAAGAGCAGGGGTTGTGAGAGAGGACGACAACGACAATAATCATAATAATAACAATTCTAATGTGCCTCTACAAATTGGAAGACCAGCTCAATGGTTCAATAACGACGACCCTGGTTTAATGCTAGGGTTTCAGCAGCAACAGCCAAACATAAACTTGGGAAATACTAATTCCATGGTGAATAGTAACAATCCAGTTTCCAAACAACCTCCTCCGCTGTCATTACAGGTAAGTGCTACTACTAACCATACGCAGCAGCAGAACCACCAGCAGCCCCCGCTTTTCCCCAAACCGGCGAATGTGGCTTTTGCTACGGCGGCGGCGATGCATTTGATGAATACTTCTCATCAGCTTGACGGGAGGGGAGGAGGAGGGATGATTGGGGTTCAGGGAGTTGGGGGTTTAACGGTGGCGGGGTCGCCGACGACTCAGATATCGCCGCCAGCGGAGGGTATGGCGAGGAGTAAGGGGGATGGGTCGTTGCATTCACCGGTGCCGTACGTGATTAACAGGCCGAGGAAGTGCAGTGCGATAGAGAAAGTGGTGGAGAGGAGACAGAGGAGGATGATTAAAAACAGAGAATCTGCTGCTAGGTCTCGGGCTCGCAAGCAGGCCTATACTTTGGAACTGGAAGCTGAAGTCGAGAAACTCAAGATGTTAAACCGAGAATTAAAAAGAAAGCAGGCTAAATTTATGGAGAAGCAGAAGGATAATAGTCAGGCTCTGGCGACACTGACCGGGGCATTGGGAGGCAAAAGGCAGTGCTTGAGAAGGACACTTACAGGACCATGGTAG | 1353 | 0.4708 | MRSNMNFKGYEDATNNNGSNKPAPANHPTLMSQSSIYSLTFEEFQSTIGGLGKDFGSMNMDELLKNIWTAEETQSLAMSSSNNNGGEASKNNTTMISSSNYNSNSNYYYSNPNGNLQRQGSLTLPRTLSQKTVDEVWRDLMKESGGGDSGGANTSTKDISGGAVAYASAMPQRQQTLGEMTLEEFLVRAGVVREDDNDNNHNNNNSNVPLQIGRPAQWFNNDDPGLMLGFQQQQPNINLGNTNSMVNSNNPVSKQPPPLSLQVSATTNHTQQQNHQQPPLFPKPANVAFATAAAMHLMNTSHQLDGRGGGGMIGVQGVGGLTVAGSPTTQISPPAEGMARSKGDGSLHSPVPYVINRPRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTLELEAEVEKLKMLNRELKRKQAKFMEKQKDNSQALATLTGALGGKRQCLRRTLTGPW | 450 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco03g2139 | 450 | MobiDBLite | consensus disorder prediction | 325 | 345 | - | - | |
| Acco03g2139 | 450 | MobiDBLite | consensus disorder prediction | 194 | 213 | - | - | |
| Acco03g2139 | 450 | Pfam | bZIP transcription factor | 370 | 419 | IPR004827 | GO:0003700|GO:0006355 | |
| Acco03g2139 | 450 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Acco03g2139 | 450 | Coils | Coil | 389 | 423 | - | - | |
| Acco03g2139 | 450 | CDD | bZIP_plant_BZIP46 | 370 | 423 | - | - | |
| Acco03g2139 | 450 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 373 | 388 | IPR004827 | GO:0003700|GO:0006355 | |
| Acco03g2139 | 450 | MobiDBLite | consensus disorder prediction | 75 | 97 | - | - | |
| Acco03g2139 | 450 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 368 | 431 | IPR004827 | GO:0003700|GO:0006355 | |
| Acco03g2139 | 450 | Gene3D | - | 368 | 423 | - | - | |
| Acco03g2139 | 450 | SMART | brlzneu | 366 | 430 | IPR004827 | GO:0003700|GO:0006355 | |
| Acco03g2139 | 450 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 31 | 450 | IPR043452 | GO:0003700|GO:0045893 | |
| Acco03g2139 | 450 | SUPERFAMILY | Leucine zipper domain | 370 | 418 | IPR046347 | GO:0003700|GO:0006355 | |
| Acco03g2139 | 450 | MobiDBLite | consensus disorder prediction | 239 | 258 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco03g2139 | Acco-ChrAcco03 | 47424808 | 47427849 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco03g2139 | 30 | 450 | bZIP Transcription Factor Family | AT1G49720 | 46.682 | 1.56e-95 | 291 |
Transcription factors information