Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2125 ATGGGTAATATCTCTGTGTGTGTTCTATTATTGTTGATATTTGCTAATTCTTTCCTCACTCATTCTTCGTATTCTCATGAGCTGACCCCCTCCAAAAGAGAAGCCCTCGAAATTATCATCGGAGGCGGCGGCGGCGTTACCGGCAAAGGTCCTTCTTCCTCCCCAGAATGTGGAGAATATTGTGGATCTCTTCCGCCGCTTCCTTCGCCTTCACGCGAGCCTCCTCCTCCACTGCCTCCTTCGCCTTCATGCGAGCCTCCTCGGCCCCAAGAGGGACTGAGGCTAAAGCGAGCGAAAAAAGTGCTTCTGAAGTTGAAGGACACCATCTGCGACCCGGGAGACAAAACATCAAACTGGAAACCATCCAACTACGTATGTAAATTCAAAGGCGTCCGTTGCGCCAAATATCCCAACGAAAAACAGAGGGCAGTAGCCGGACTTGACTTTAACGGCTACGCATTATCCGCGGCGGACAAAAATAAACCGCTGGATCTTTTCGGAGTCCTGGCCCAGATTCCTGAGCTAGTATTCTACCACGTCAACTCCAACAATTTCAGCGGCCAAGTCCCACCTCAAATCTCCACATTCCAATATTTCTACGAGCTCGACCTCAGCAACAACAAAATATTCGGTACATTCCCAAACGAGGTCCTTCAATCAAAACAACTCTTGTTCCTAGATCTCAGGTTCAACCAACTTTACGGCTCAATTCCACCTCAGCTTTTTAAGTTGCAGCTTGACGTCATCTTCATCAACAACAACGAACTCTCCGGAATCCTTCCGGATGAAGAATTCGGGTGCACGCCGGCAAGGTATCTCACTTTCGCAAACAACAAGTTAACTGGTCCGATCCCCAAGAGTATCGGTAAAGCTACAAATATTACCGAAGTTCTGTTCTTGGGGAATCAGTTTTCAGGTTGTTTGCCTTATGAGATTGGGTTTTTGGTAAACGCTACGGTCTTTGATGTGAGCAAGAATAGGTTGACTGGTCCGATCCCACTTTCGTTTGCTGGCTTAGATAAGATTCAGTTTCTGAATTTGGCCGATAACGAATTTTACGGGCCCGTTCCGGAGTCGGTTTGCCAGCTTCCGAAGCTCCAGAAAGGCGGGAATTTGACGCTGTCGGGTAATTATTTTACCCAGGTGGGACCCGAATGCAGGAAACTGATTGACCGGAAAGTTCTGGATGTGCGACGGAATTGTATTTTGGGACTTGATGATCAGAGAACACCGGCTGAGTGTAACACGTTTTTCTCCAAGGTTAAGCCATGTCCGAACCCCGAGACTTTGAACATCGTACCTTGTTTCAAGAACTATCAGAGCAACAAGGAGGTGGTGCCGCCGGGACCAGAAGCAGGGGGAGGAGGAGGTTCGCCGGCGCCTCCGGTTCCGGTGACCTACAAATCCCTCAAGCCCCATCACTTGTGA 1428 0.4888 MGNISVCVLLLLIFANSFLTHSSYSHELTPSKREALEIIIGGGGGVTGKGPSSSPECGEYCGSLPPLPSPSREPPPPLPPSPSCEPPRPQEGLRLKRAKKVLLKLKDTICDPGDKTSNWKPSNYVCKFKGVRCAKYPNEKQRAVAGLDFNGYALSAADKNKPLDLFGVLAQIPELVFYHVNSNNFSGQVPPQISTFQYFYELDLSNNKIFGTFPNEVLQSKQLLFLDLRFNQLYGSIPPQLFKLQLDVIFINNNELSGILPDEEFGCTPARYLTFANNKLTGPIPKSIGKATNITEVLFLGNQFSGCLPYEIGFLVNATVFDVSKNRLTGPIPLSFAGLDKIQFLNLADNEFYGPVPESVCQLPKLQKGGNLTLSGNYFTQVGPECRKLIDRKVLDVRRNCILGLDDQRTPAECNTFFSKVKPCPNPETLNIVPCFKNYQSNKEVVPPGPEAGGGGGSPAPPVPVTYKSLKPHHL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2125 475 MobiDBLite consensus disorder prediction 446 475 - -
Acco03g2125 475 SUPERFAMILY L domain-like 100 404 - -
Acco03g2125 475 Pfam Leucine rich repeat N-terminal domain 98 133 IPR013210 -
Acco03g2125 475 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 15 447 - -
Acco03g2125 475 MobiDBLite consensus disorder prediction 67 87 - -
Acco03g2125 475 FunFam Leucine-rich repeat receptor protein kinase EMS1 260 359 - -
Acco03g2125 475 MobiDBLite consensus disorder prediction 64 90 - -
Acco03g2125 475 Gene3D Ribonuclease Inhibitor 96 266 IPR032675 -
Acco03g2125 475 Gene3D Ribonuclease Inhibitor 267 432 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2125 Acco-ChrAcco03 47309971 47311398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2125 83 420 Leucine-rich Repeat extension Gene Families AT3G24480 41.471 2.29e-74 240