Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2114 ATGAGCTTCAATTCCAGGAATCTTCATTTGGGGTGTAAAGTTTTGTTCTTTCATCTTCTTCTTCTTCTTCGGTCATTTGCTCTGAACCCAGACGGAGTTCTCTTATTATCCTTCAAGTATTCGATCCTCAGTGACCCACTTTTAGTCTTAGAAAATTGGAACTATAGCGATGTGTCACCATGCTCGTGGAATGGAGTCACATGTACAAAAATTGGAGGCAAGTTTAGAGTGACTAGTTTGGTGCTTCCCCAAAGCAAGCTTCTGGGTTCAATTTGTGAAGACCTTGGGATGATTGAACACCTCAGAGAGCTTGATCTTTCCAACAATTTGCTTAATGGGTCAGTACCCAATTCCATATTCAACGCTTCTGAGCTTCAAGTTCTTTCTCTAGCCAGCAATGTCATCTCAGGTGAGCTATCTGAGTCCATTGGTGAGTTGAAGACTCTTCAACTTTTAAACCTATCAGATAATGCCTTTGGTGGGTCAGTCCCAAAAAGTCTTGTTTCACTGAAAAATCTTACCTTTGTTTCTTTGAGGAGTAATTACTTTTCTCGTGAAGTCCCAAGTGGGTTTCACTCAGTTCAGATCTTAGATCTGTCTTCAAATTTCCTTAATGGGTCTTTACCTGATGACTTTGGTGGGGATAGCTTGAAATACTTGAACATCTCCTACAACAAAATTTCAGGAACAATCCCACAAGAATTTGCCACAAAGATACCTGCAAACTCCACAATAGATCTCTCCTTCAACAATCTAACAGGTCCAATACCACAATCTCTGGCTTTGCTTAACCAGAAACCAGAGGCACTTTCTGGAAACTCTGATCTCTGTGGGAAGCCATTGAAAATCCCTTGTGCTATTCCTTCATCTCTTTCAAAACCACCCAATTCAACCACATCTTCACCAACACCAGCAATTGCAGTTATACCCAAAACAATTGACACCAACCCTAAAACAAACAGTTCAGGAACCCCCAATGCGTCTCAGAATAAGCCACCAAATAGTCTCAAACCATCCAGCATAGCCGGAATTGTCGTCGGCGACATTGCCGGAGTAGGCATTTTAGTCGCAATCGTTCTCTTGGTCTACCAACAACGGAAGAAAAAAGATGATAAACCCACTGTAAATGTTATCAAGATTACATCGAAACAAGAAGGCAAAGAAAATAGCAAAAAATCCATAATCCCCTGTTTCTGGTTAGCAATTGACGACAAGGAGACGTCAGAAGCAACGAGCTCCGACAGCGACCAAGAGATTAATAATGATATAACGAACATTGACATGACGACCCAGAATGAGAGTCTCCAGAAAGAAGGGAGGCTTGTGACGGTGGACGGAGAAACGAGGCTGGAGCTAGAAACATTACTGACGTCATCGGCGTATATTCTGGGAACAAGCAGAGGAAGCATAGTGTACAAAGCAGTGCTTGAAGATGGAAGAGCTTATGCTGTGAGGAGGATAGGAATTGGAGAGTGTGCATTGGAGAGGATGAAGGATTTCGAGAATCAAGTGAAAACAATCGCTAAGATTCGTCATCCTAATTTGGTTAGGGTTCGCGGATTCTGCTGGGGAATGGATGAGAAGCTTCTGATTTGTGACTATGTCCCCAATGGAAGCCTCACCAACCTCTGTCACAGAAGAACAGGGTCATCGCCGTTGAGCTTGGCGTTGGAGGCTAGGTTGAAAATAGCAAGAGGAATAGCACGAGGCATAGCTTTCATCCACGACAAGAAACATGTCCACGGCAACATTAAACCCTCCAACATCCTCTTCAACTCCGACATGGAACCTGTCATCACCGACCTCGGCCTCGATCGCATCCTCTGCAACGCCACCACCAACAACTTCAACCTCCGAGCCAACGGTTCATCTCGCCAATTAGCCAACCTTAACCAACATGAACAACAAGACCAACACCTCCCTTCGTCTTCTTCTGGTGGCGCCCACCCAATGCCCTATCAAGCACCAGAGTGGTTCCAAAACATCAAGCCCAACCCAAAGTGCGATGTGTATTCCTTTGGCACTGTCTTGCTTGAGCTTCTCAGTGGGAGGTCTGTCTCAGACTTGGACATAGGTCAGTGGCCTCAGTATGATGACGTGGAGGAGGAGAGGATCAGGGTTATGAGGGTGGCTGACGCGACAATAAGGTCTGAGATTGAAAATAAGGAACATGTTATATTGGGTTGCTTCAAGTTGGGGCTTGCTTGTGCTTCTCCCCTGCCACAAAAGAGACCCTCCATGAAAGAAGCTCTCCACATCCTTGACAGGTTGATTCGAAGCTAA 2283 0.4477 MSFNSRNLHLGCKVLFFHLLLLLRSFALNPDGVLLLSFKYSILSDPLLVLENWNYSDVSPCSWNGVTCTKIGGKFRVTSLVLPQSKLLGSICEDLGMIEHLRELDLSNNLLNGSVPNSIFNASELQVLSLASNVISGELSESIGELKTLQLLNLSDNAFGGSVPKSLVSLKNLTFVSLRSNYFSREVPSGFHSVQILDLSSNFLNGSLPDDFGGDSLKYLNISYNKISGTIPQEFATKIPANSTIDLSFNNLTGPIPQSLALLNQKPEALSGNSDLCGKPLKIPCAIPSSLSKPPNSTTSSPTPAIAVIPKTIDTNPKTNSSGTPNASQNKPPNSLKPSSIAGIVVGDIAGVGILVAIVLLVYQQRKKKDDKPTVNVIKITSKQEGKENSKKSIIPCFWLAIDDKETSEATSSDSDQEINNDITNIDMTTQNESLQKEGRLVTVDGETRLELETLLTSSAYILGTSRGSIVYKAVLEDGRAYAVRRIGIGECALERMKDFENQVKTIAKIRHPNLVRVRGFCWGMDEKLLICDYVPNGSLTNLCHRRTGSSPLSLALEARLKIARGIARGIAFIHDKKHVHGNIKPSNILFNSDMEPVITDLGLDRILCNATTNNFNLRANGSSRQLANLNQHEQQDQHLPSSSSGGAHPMPYQAPEWFQNIKPNPKCDVYSFGTVLLELLSGRSVSDLDIGQWPQYDDVEEERIRVMRVADATIRSEIENKEHVILGCFKLGLACASPLPQKRPSMKEALHILDRLIRS 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2114 760 FunFam Leucine-rich repeat receptor-like protein kinase 28 189 - -
Acco03g2114 760 Pfam Protein kinase domain 463 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2114 760 Pfam Leucine Rich Repeat 100 119 IPR001611 GO:0005515
Acco03g2114 760 Gene3D Transferase(Phosphotransferase) domain 1 535 760 - -
Acco03g2114 760 MobiDBLite consensus disorder prediction 632 649 - -
Acco03g2114 760 FunFam Leucine-rich repeat receptor-like protein kinase 193 287 - -
Acco03g2114 760 SUPERFAMILY Protein kinase-like (PK-like) 462 754 IPR011009 -
Acco03g2114 760 SUPERFAMILY L domain-like 31 282 - -
Acco03g2114 760 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Acco03g2114 760 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Acco03g2114 760 Gene3D Ribonuclease Inhibitor 193 287 IPR032675 -
Acco03g2114 760 MobiDBLite consensus disorder prediction 632 655 - -
Acco03g2114 760 MobiDBLite consensus disorder prediction 313 336 - -
Acco03g2114 760 PANTHER OS05G0588300 PROTEIN 169 755 - -
Acco03g2114 760 Gene3D Phosphorylase Kinase; domain 1 420 534 - -
Acco03g2114 760 ProSiteProfiles Protein kinase domain profile. 457 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2114 Acco-ChrAcco03 47221056 47224584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2114 14 757 Receptor kinase-like Gene Family AT4G37250 49.086 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco03g2114 Pkinase 1.5e-29 CL0016